Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00336 ATGGGTAGGAGAATACTGAACGATGCTTTGAGAACGATTGTGAACGCGGAGAGGAGAGGAAAAGCTACAGCGAACCTACAACCAATCTCCAATGTCATGGCATCGTTTCTCAAGATCATGAAAGATCGAGGATATATCAAAGATTTTCAAGTATTTGATCCGCATAGAGTGGGAAGGATAACTGTTGAACTGCAAGGCAGGGTAAATGATTGCCGGGCTCTCACATATAGGCAGGAAATCAAGGCCAAGGACATCGAAGAGTACAGATTACGTATGCTTCCAACGCGTCAGTGGGGTTATGTTGTGATCACGACTCCCAATGGTGTTTTGGATCATGAAGAGGCCATCAAACAGAACGTGGGCGGTCAGGCAATGCAGCTGAGGCTGGACGATAAGATTGGATGTCAGGTACTGGAATCCCAACAACGCAAGACCACCGGGCTGTACTTAGAGGAAGAGGTCACGATTTCAACTCCACGGCACTCACTACACATGGAGGAAACCCACTTTGTGGGCTTGAACCCAAAACCTCCTACAAGGGGAGGGTACAAACCAACCATCTGTGCTAGTAGGTTGGGGAGGGTACACACACCATCCATCTGTGCTCGTAGGACATTGGCAAATGTTGGATTCAAGACGATGCAATTCGAGGCATATGCACGTTTTATAGTTAATGTAGCCATAGTTCCTATTATGCAGCAGGATAGGCATGGTTTAGAAACCTTTTCACATTATACAATGGTTTTCCTGCAATGA 756 0.463 MGRRILNDALRTIVNAERRGKATANLQPISNVMASFLKIMKDRGYIKDFQVFDPHRVGRITVELQGRVNDCRALTYRQEIKAKDIEEYRLRMLPTRQWGYVVITTPNGVLDHEEAIKQNVGGQAMQLRLDDKIGCQVLESQQRKTTGLYLEEEVTISTPRHSLHMEETHFVGLNPKPPTRGGYKPTICASRLGRVHTPSICARRTLANVGFKTMQFEAYARFIVNVAIVPIMQQDRHGLETFSHYTMVFLQ* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00336 251 FunFam 40S ribosomal protein S15a 1 68 - -
Eupl09g00336 251 SUPERFAMILY Ribosomal protein S8 3 125 IPR035987 GO:0003735|GO:0005840|GO:0006412
Eupl09g00336 251 ProSitePatterns Ribosomal protein S8 signature. 99 116 IPR000630 GO:0003735|GO:0005840|GO:0006412
Eupl09g00336 251 Gene3D - 69 126 - -
Eupl09g00336 251 Gene3D - 2 68 - -
Eupl09g00336 251 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 125 IPR000630 GO:0003735|GO:0005840|GO:0006412
Eupl09g00336 251 Pfam Ribosomal protein S8 6 125 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00336 Eupl-Chr9 9471094 9496523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00336 1 125 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 79.200 7.35e-74 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00336 K02957 - ming:122064374 234.572