Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00330 ATGGCTACCGTTCCTGGTGCTTTGATTTGGGAGATCGTGAGGAAGAACAACGCATTTCTCGTGAAGAAGTTTGGAAATGGCACTCAAAAGGTGCAGTTTAGCAAGGAAAGCAACAATCTCTACAACGTTAACTCCTACAAGTACTCAGGATTAGCAAACAAGAAGACAGTTTCGATTCAAGCTGGAGGGAAAGATCTTTCCGTGGTGCTTGCAACGACGAAGACGAAGAAGCAGAACCAACCTGCAAAGTTGCTTCACAAGTCTGTCATGAAGAAGGAGTTCCGTAATATGGCAAAGGCTGTGGCCAACCAGGTTGGAGATAATTACTACAGGCCAGATCTGAAGAATGCAGCCCTTGCAAGGCTGAGCGCTGTGCACAAGAGCCTTAAGGTTCGCAAGTCTGGTGCCAAGAAGAGGAACAGGCAGGCGGTTAAGATCCATGGTAGGAAGTGA 453 0.4724 MATVPGALIWEIVRKNNAFLVKKFGNGTQKVQFSKESNNLYNVNSYKYSGLANKKTVSIQAGGKDLSVVLATTKTKKQNQPAKLLHKSVMKKEFRNMAKAVANQVGDNYYRPDLKNAALARLSAVHKSLKVRKSGAKKRNRQAVKIHGRK* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00330 150 Gene3D - 6 133 - -
Eupl09g00330 150 FunFam 60S ribosomal protein L28 5 133 - -
Eupl09g00330 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Eupl09g00330 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00330 Eupl-Chr9 9366105 9370751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00330 1 143 Cytoplasmic Ribosomal Protein Gene Family AT2G19730 74.825 1.88e-73 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00330 K02903 - nnu:104604423 259.996