Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00318 ATGGGAATCTGCATATCCGTTGCATCTTCGGATATTCAAGAGACTAAGAATGACGACGAAAATGCGGTATTCCTCGAACAGACTCTGTGTTCTAATGGAATTCCAAGGCTTGCTTCATTTCATTCTCAGCAAGGGAACAAAGGACCAAACCAAGATGCTGCCATCCTCTACCAGGGCTTTGGAATGGAAGGAGGAGTTTTTTGTGGAGTATTTGATGGGCATGGAAGGAATGGTCACATAGTGAGCAAATTAGTGAGAAACCGCTTACCGTCGCTGTTACTAGGCCAGCGGAATGCGCTTGTTTCGCTTAATCCCGACGCTAATAGTGACGATTATGGCGATCACGAGGAGGGGTTAGATGGTGTATTGGTCTCAACCAGTATGTTTGATGAATGGAGAATGGCTTGTCTTTCTGCTTTTATGGTTATGGACAAGGAAATCAAGCTTCAAGAGAACTTGGATTGCTCTAGCAGTGGGACTACTGCAGTGACCATCATAAAACAGGGTGAAGATCTTGTTATTGCTAATCTTGGTGATTCAAGGGCAGTTTTGGGCACCATTTCTGATACTAATGAACTGATGGCTGTTCAGCTAACAATAGACTTAAAGCCTGGCTTACCCAAGGAAGCTGAACGTATAAAGAAGAGCAACGGTCGTGTATTTGCTCTTACAGGCGAACCTCACATTCAGCGTGTGTGGTTGCCCAACGATGACTTTCCAGGCCTTGCCATGGCAAGAGCCTTTGGAGATTTCAAGCTCAAAGACTATGGCATAATTTCTACCCCACAAATCTTCCATCATCACCTGAAAAGTAAAGATCAGTTTCTTGTTCTTGCAACTGATGGGGTGTGGGATGTGCTTAGTAACCAAGAAGTTGCATCAATCGTGTGGTCAGCAAATAGCGAGGAGGCAGGAGCAAAAGCAGTAGTGGATGCAGCAGTTGCTGCATGGAGACGCAGGTTCCCTTCTTCAAAGGTTGATGACTGCACCGTTGTTTGCCTGTTCTTGCAGGAGAGGCATCAGCATCTCCCCTTGTCCAAGGAGAGCTGA 1050 0.4581 MGICISVASSDIQETKNDDENAVFLEQTLCSNGIPRLASFHSQQGNKGPNQDAAILYQGFGMEGGVFCGVFDGHGRNGHIVSKLVRNRLPSLLLGQRNALVSLNPDANSDDYGDHEEGLDGVLVSTSMFDEWRMACLSAFMVMDKEIKLQENLDCSSSGTTAVTIIKQGEDLVIANLGDSRAVLGTISDTNELMAVQLTIDLKPGLPKEAERIKKSNGRVFALTGEPHIQRVWLPNDDFPGLAMARAFGDFKLKDYGIISTPQIFHHHLKSKDQFLVLATDGVWDVLSNQEVASIVWSANSEEAGAKAVVDAAVAAWRRRFPSSKVDDCTVVCLFLQERHQHLPLSKES* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00318 349 SMART PP2C_4 26 334 IPR001932 -
Eupl09g00318 349 Pfam Protein phosphatase 2C 119 313 IPR001932 -
Eupl09g00318 349 PANTHER PROTEIN PHOSPHATASE 38 334 IPR015655 GO:0004722|GO:0006470
Eupl09g00318 349 SUPERFAMILY PP2C-like 29 338 IPR036457 -
Eupl09g00318 349 Gene3D - 34 339 IPR036457 -
Eupl09g00318 349 ProSiteProfiles PPM-type phosphatase domain profile. 37 336 IPR001932 -
Eupl09g00318 349 CDD PP2Cc 36 336 IPR001932 -
Eupl09g00318 349 FunFam Probable protein phosphatase 2C 12 30 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00318 Eupl-Chr9 9160928 9163447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00318 1 341 PP2C-type Phosphatase Gene Family AT5G26010 52.586 3.69e-110 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00318 - - msin:131217433 482.641