Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00317 ATGGTGGAGAAAACGAAGGGCAGAAAGGAGGAGGTGGTTACAAGGGAGTACACCATCAACCTTCACAAGCGCCTACATGGCTGCACATTCAAAAAGATGGCTCCTAAGGCCATAAAAGAGATCAGGAAGTTTGCTCTGAAGGCCATGGGAACTAAGGATGTGAGGGTAGACGTAAAGCTGAACAAACACATCTGGAGCAGGGGAATCCGCAGTGTACCAAGGAGGATCAGGGTTCGCATTGCTCGTAAGAGGAACGATGATGAAGACGCCAAGGAAGAGCTCTACTCTCTTGTCACGGTCGCAGAAATTCCCCCGGAGGGTCTCAAGGGGTTGGGCACAAAGGTCATCGAAGAAGCTGATGATTGA 366 0.5027 MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKMAPKAIKEIRKFALKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPPEGLKGLGTKVIEEADD* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00317 121 Gene3D - 9 120 IPR023621 -
Eupl09g00317 121 Pfam Ribosomal protein L31e 11 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Eupl09g00317 121 SUPERFAMILY Ribosomal protein L31e 11 92 IPR023621 -
Eupl09g00317 121 PANTHER 60S RIBOSOMAL PROTEIN L31 2 118 IPR000054 GO:0003735|GO:0005840|GO:0006412
Eupl09g00317 121 ProSitePatterns Ribosomal protein L31e signature. 54 68 IPR020052 GO:0003735|GO:0005840|GO:0006412
Eupl09g00317 121 CDD Ribosomal_L31e 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Eupl09g00317 121 SMART Ribosomal_L31e_2 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Eupl09g00317 121 FunFam 60S ribosomal protein L31 6 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00317 Eupl-Chr9 9156764 9160126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00317 2 120 Cytoplasmic Ribosomal Protein Gene Family AT2G19740 85.714 3.89e-71 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00317 K02910 - nnu:104588203 210.69