Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00309 ATGGGTAAGGTGCACGGATCTCTGGCTCGAGCTGGGAAGGTGAGAGGCCAAACCCCAAAGGTCGCAAAGCAAGACAAGAAGAAGAAGCCCAGAGGTAGGGCTCACAAGAGGATGCAGTATAACAGGCGCTTCGTCACCGCTGTTGTTGGATTTGGGAAGAAGAGGGGACCCAACTCGTCAGAGAAATTTAAGAACAATGCAAGCTATAATAGTTTTCTGTTGCATTCTTTCAATAAACCCCAGCATTGGTACAAGGGCAGATCCAACCTTGCAGTATCTTTAGCTGCTAGTAGTGGTCCTGGGCACGGGCAATTTAGTTCATAA 324 0.4815 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEKFKNNASYNSFLLHSFNKPQHWYKGRSNLAVSLAASSGPGHGQFSS* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00309 107 MobiDBLite consensus disorder prediction 22 40 - -
Eupl09g00309 107 PANTHER 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI 1 65 - -
Eupl09g00309 107 Pfam Ribosomal protein S30 3 59 IPR006846 GO:0003735|GO:0005840|GO:0006412
Eupl09g00309 107 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00309 Eupl-Chr9 8974344 8977312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00309 1 62 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 96.774 6.92e-30 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00309 K02983 - zof:121991985 118.627