Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00293 ATGGATAGTTTGATTTGGGACGACAGCCCATCATCTGTGATGAACACATCAGCTGTTGCACCAAGCCTATGGAGCAATCAGCAACATGAAATTGGAGAAAGTTCCGGGGTTTCTAGTGCTGATTACAGAATAATTGGTGGAGAAATGGATCTTGCTGAGGGTTTCTTTGTCATGAATCCTGAGTTCCAAGGAATTAAAACATGCAACAGTACTAGTTCAAATTCGGATAGAGTAGGCGAAATGATACAACAGTTAGCTCCAGCTTTAGATTCGATAAATGTTGTGTCAAATTTGAACTTATTGAAGAGGCAAGAAGCGATAAGGTTAGCAGCAGATACCGTGCTTGCTAAATCAGGAGCTGGAACTACTTGGGGAGAAGCTCTAACCACCGAATTATGTTCTTCTCCTCTAATCAACAGGCCTTATATCATGAGTCCATTGAGTGGACCAATGGCGGATTTTGGCACCGCTAACCGACCACCGATTGATAATAAGGGCATCGAAGACGACAAGGTCGGATTTTCCGCATCGGATTCACTTGAGTCCCTCGACTGCTTGCTGTCGGCAAAAAACAGCAATACAGACACATCGGTGGAAGATGATAGCATCTCCATGATGTTTTCTGATTGCAGAAATTTATGGAATTTTGGTTCTGGCAGTGCTGCGTCATCAGGAGAGTCTGAGGACATTGGCTCAAGTGAAGACAACAAAGAATCATGCTGGCCGGTAAATGAGCTCGATGAAACAGTTTCTCAAGGTTCTTCAAATCCTAATCTCAACCAGGCCAGATCTTCAGACACTAGGAATTCTTCAAAGAGAAACAAGGAGCAAGAAGAGCTCAAAGCGAGTGAGAATTATCATTATTTCGATCTTCTTCGGTCGGATTCTTTTACGACGGAGGGCGGTTTTCGGCTCATCTCCGAGAACCCACCAAAACCGAAGAAACCCAGATTGGAGAAGCATCACACACCGTCGAACATCAACTTCCAACAACCGACTTCTTCTGTATCTTTGATCGATGAGCCCGACACTGAGGCCATTGCACACATGAAGGAGATGATTTATAGAGCTGCAGTCTTCAGGCCTGTGAATTTAGGCATGGAGGTGGTGGAGAAACCCAAGAGGAAGAATGTTAGAATATCAAGTGATCCACAGACAGTAGCTGCAAGACAAAGGAGGGAGAGAATAAGTGAGAGGATTAGGGCTTTGCAAAGGCTGGTTCCTGGTGGGAGCAAGATGGACACTGCATCAATGCTTGATGAGGCTGCAAACTACCTCAAATTCCTCAGGTCACAAGTTAATGCCCTAGAAACCCTAGGCCACAAGCTTGATTCTGTGAATTTCACCTCTACCAACCTTCCCTTCTCATCACCACCATTCAACCACACTTTTCCCATGCAAACCTTTTTCCCATTCCCAAAACCCTAA 1428 0.4475 MDSLIWDDSPSSVMNTSAVAPSLWSNQQHEIGESSGVSSADYRIIGGEMDLAEGFFVMNPEFQGIKTCNSTSSNSDRVGEMIQQLAPALDSINVVSNLNLLKRQEAIRLAADTVLAKSGAGTTWGEALTTELCSSPLINRPYIMSPLSGPMADFGTANRPPIDNKGIEDDKVGFSASDSLESLDCLLSAKNSNTDTSVEDDSISMMFSDCRNLWNFGSGSAASSGESEDIGSSEDNKESCWPVNELDETVSQGSSNPNLNQARSSDTRNSSKRNKEQEELKASENYHYFDLLRSDSFTTEGGFRLISENPPKPKKPRLEKHHTPSNINFQQPTSSVSLIDEPDTEAIAHMKEMIYRAAVFRPVNLGMEVVEKPKRKNVRISSDPQTVAARQRRERISERIRALQRLVPGGSKMDTASMLDEAANYLKFLRSQVNALETLGHKLDSVNFTSTNLPFSSPPFNHTFPMQTFFPFPKP* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00293 475 MobiDBLite consensus disorder prediction 248 280 - -
Eupl09g00293 475 MobiDBLite consensus disorder prediction 248 267 - -
Eupl09g00293 475 MobiDBLite consensus disorder prediction 302 331 - -
Eupl09g00293 475 Coils Coil 419 439 - -
Eupl09g00293 475 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 190 460 IPR045843 GO:0003700|GO:0006355
Eupl09g00293 475 Pfam Helix-loop-helix DNA-binding domain 390 429 IPR011598 GO:0046983
Eupl09g00293 475 Gene3D - 385 448 IPR036638 GO:0046983
Eupl09g00293 475 SMART finulus 386 435 IPR011598 GO:0046983
Eupl09g00293 475 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 386 444 IPR036638 GO:0046983
Eupl09g00293 475 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 380 429 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00293 Eupl-Chr9 8717337 8720515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00293 114 467 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 47.790 2.08e-83 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl09g00293 HLH 3.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00293 - - nnu:104604448 534.643