Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00285 ATGGTACTCCCTTTTCAGGGACCTGTGGTTCCCCAATACCTACGCACAGCTACTGTATCCACCATAAAGCCCTTGACTGGATACCAATATCGCTTTGCAATTTATAAAACGAGTGATTCAACCCTTCCACCCATCCTCAATGCAGTTGAGATTTATACAGTCAAACAGTTCTCGCAATCACCAACAAACAGTGAAGATGTTGATGCGATTACAAACATCAAATCAACGTATCGGGTACAGAGAGAATGGGTAGGTGATCCATGTCTGCCAAGGAATTACTCCTGGGACGGCCTGATGTGCAGCTACAATGGTTCAAATCCTCCCACTATCATTTCACTAAACTTGACCTCAAACGGTTTGACTGGGGAAATAGCAGCTTCTCTGAGCAACCTCACATCAATTGAGTCCTTGGATTTGTCAAGCAATAGCTTAACTGGACCAGTGCCTGAGTTTCTATCAAAACTACCCTCCCTAAGGTTCCTGTCTATAAAAGGCAACGATCTTACAGGTTCTGTTCCTACGGAACTTATAGAAAGAGAAAAGGATGGATCACTAACATTGAGTGTGGACGATCGAAATATTTGTGCCTTGGATTCATGCAAAGAGGAAAACAAGAACAAAAACATTATCATTCCAGTAGTTGCATCAGTTGCTTCGGCAATGGTGCTATCAATCGTATTGATTATTTTGTGGAGACTAAAAAGGAGAAGACAACCAGCTGTAAATCTGTTTTCCAACTCCAACAAAGAAGGCAGCTCCTTCGCATCAAATAACAGACAGTTCACCTATGTTGATATTGTGAGTATTACCAATGATTTCCAAAAAGTTATCGGCAAAGGAGGATTTGGAACTGTTTACCATGGATACTTGAAAAATGGCACTGAAGTTGCTGTAAAGATGCTCTCTCAATCATCGTCTCAAGGGTCTAAGGCATTCCAGACCGAGGCTGAACTCTTAATGAGAGTTCATCATAGGAACTTGGCCTCTTTTGTTGGGTATTGTGATGAAGGTAGCAACAAGGCACTCATTTATGAGTACATGGCTAATGGGGACCTAAAACATCATCTTATGGAAAGAAGTGCAAATGCCTTAAGTTGGGAAAGGAGACTTCAAATAGCAATAGACACAGCACAAGGACTGGAATACTTACATAATGGTTGTAAGCCACCTATAATTCATAGAGATGTGAAGTCAGATAATATCCTTTTAAGCGAAAGGTTGGAGGCTAAAATGGCAGATTTTGGAGTTTCAAAGGTTTATCCTAGTGATGGTCTCACTCATGTATCAACTGCAGTCATGGGCACACCAGGGTATCTTGACCCAGAGTACTACATTTCTGATAAGTTGAATGAGAAAAGTGATGTTTATAGTTTTGGGATTGTTCTCTTAGAGCTAATTACAGGGCAACCTGCAATCATACAAATCTCTGAGAGGATTCACATAGTTCAATGGGTGAGTCCCATGCTTGCAAGAGGGGAAATAAGAAGTATTGTTGATCCAAGGTTACAAGGAGATTTTGACATAAATTCTCTTTGGAAAGTTATAGAGATAGCAATATCATGCACAGCATCTACCTCCATCCAAAGGCCAACCATGAGTCAGGTATTGTCTGAATTAAAAGAGTGTTTGTCAACAGAGGAACCTTGTGAAAAAACATCAATCTCCGAAGACGCTAATTCAAAATCAAGCAATTCCATTGAAATGATTCATGTTGATCATGAATCCATGGTCGGCCCTCCAGCAAGGTAG 1749 0.4077 MVLPFQGPVVPQYLRTATVSTIKPLTGYQYRFAIYKTSDSTLPPILNAVEIYTVKQFSQSPTNSEDVDAITNIKSTYRVQREWVGDPCLPRNYSWDGLMCSYNGSNPPTIISLNLTSNGLTGEIAASLSNLTSIESLDLSSNSLTGPVPEFLSKLPSLRFLSIKGNDLTGSVPTELIEREKDGSLTLSVDDRNICALDSCKEENKNKNIIIPVVASVASAMVLSIVLIILWRLKRRRQPAVNLFSNSNKEGSSFASNNRQFTYVDIVSITNDFQKVIGKGGFGTVYHGYLKNGTEVAVKMLSQSSSQGSKAFQTEAELLMRVHHRNLASFVGYCDEGSNKALIYEYMANGDLKHHLMERSANALSWERRLQIAIDTAQGLEYLHNGCKPPIIHRDVKSDNILLSERLEAKMADFGVSKVYPSDGLTHVSTAVMGTPGYLDPEYYISDKLNEKSDVYSFGIVLLELITGQPAIIQISERIHIVQWVSPMLARGEIRSIVDPRLQGDFDINSLWKVIEIAISCTASTSIQRPTMSQVLSELKECLSTEEPCEKTSISEDANSKSSNSIEMIHVDHESMVGPPAR* 583
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00285 582 SMART serkin_6 271 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00285 582 FunFam Leucine-rich repeat receptor-like protein kinase 247 346 - -
Eupl09g00285 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 391 403 IPR008271 GO:0004672|GO:0006468
Eupl09g00285 582 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 347 552 - -
Eupl09g00285 582 Pfam Protein tyrosine and serine/threonine kinase 273 539 IPR001245 GO:0004672|GO:0006468
Eupl09g00285 582 Pfam Malectin-like domain 7 54 IPR024788 -
Eupl09g00285 582 FunFam Leucine-rich repeat receptor-like kinase 65 195 - -
Eupl09g00285 582 SUPERFAMILY L domain-like 68 176 - -
Eupl09g00285 582 Gene3D Transferase(Phosphotransferase) domain 1 347 567 - -
Eupl09g00285 582 ProSiteProfiles Protein kinase domain profile. 271 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00285 582 ProSitePatterns Protein kinases ATP-binding region signature. 277 299 IPR017441 GO:0005524
Eupl09g00285 582 Coils Coil 581 582 - -
Eupl09g00285 582 Gene3D Ribonuclease Inhibitor 67 187 IPR032675 -
Eupl09g00285 582 CDD STKc_IRAK 277 541 - -
Eupl09g00285 582 PANTHER OS07G0107800 PROTEIN-RELATED 11 546 - -
Eupl09g00285 582 SUPERFAMILY Protein kinase-like (PK-like) 252 539 IPR011009 -
Eupl09g00285 582 MobiDBLite consensus disorder prediction 548 582 - -
Eupl09g00285 582 Pfam Leucine rich repeat 112 168 IPR001611 GO:0005515
Eupl09g00285 582 Gene3D Phosphorylase Kinase; domain 1 243 346 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Eupl09g00285 Eupl-Chr9 8597522 8602764 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00285 7 582 Receptor kinase-like Gene Family AT1G51800 48.322 0.0 575
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Eupl09g00285 PK_Tyr_Ser-Thr 3.9e-49 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00285 - - nnu:104588225 798.505