Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00283 ATGGTTTTTCATCTCCCGTTGATCAAAAAAAAAGTCGATGCTATTACGAACATCAAAGCAACATATCAGATTCAGAGAAACTGGGTGGGTGATCCATGTCTGCCAAAGACTTACTACTGGAACGGCCTGAATTGCAGCTACATTGATTCAAATCCTCCCAGTATAATTTCACTAAACCTAGCCTCAAGCAATTTGACTGGGGACATAGCTGCTTCTCTAGCCAAGCTCACATCAATTGAGTCATTGGATTTGTCAAACAATAGCTTAACCGGACCAGTGCCCGAGTTTTTGTCAAAACTACCATCCCTAAGGCTCCTATCTTTAAAAGGCAACCAACTCGCAGGTTCTGTTCCTACTGCCCTTATAGAAAGATCAAAGGATGGATTACTATCATTGAGTGTGGACAAGCAAAATCTATGTGCCTTGGACTCATGTAAAGAGAACAATAAAGACAAAAAGATTATCATTCCAGTAGTTGCATCGGTTACTTCAGCAGTGGTCCTATTAATCGTAGTGATTATAGTGTGGAGACTAAAAAGGAGAAGACAACCAGAAGCTTGGGTTAGGGATTTAAAAAAGGGTTTCCATGAATTTGCAAAGCTGGGTTCCAACTTCAAAAAAGAAGGCATCTCCTTAGCATCAAATAATCAACAGTTCACCTATGTTGATATTGTGAGTATTACCAACAACTTCCAAAGAATTATTGGCAAAGGAGGATTCGGAACTGTTTACCATGGATACTTGGAAAATGGCACGGAAGTTGCCGTCAAGATGCTCTCTCAATCATCATCTCAAGGTCCTAAGGAATTCCAGACCGAGGTTAGTGATATTGATCCTACAGAAATGCTCCAGCAAAAGCATTTAATCAAAGAGAATAAAATGACACAGTTGTAG 894 0.3993 MVFHLPLIKKKVDAITNIKATYQIQRNWVGDPCLPKTYYWNGLNCSYIDSNPPSIISLNLASSNLTGDIAASLAKLTSIESLDLSNNSLTGPVPEFLSKLPSLRLLSLKGNQLAGSVPTALIERSKDGLLSLSVDKQNLCALDSCKENNKDKKIIIPVVASVTSAVVLLIVVIIVWRLKRRRQPEAWVRDLKKGFHEFAKLGSNFKKEGISLASNNQQFTYVDIVSITNNFQRIIGKGGFGTVYHGYLENGTEVAVKMLSQSSSQGPKEFQTEVSDIDPTEMLQQKHLIKENKMTQL* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00283 297 ProSitePatterns Protein kinases ATP-binding region signature. 235 257 IPR017441 GO:0005524
Eupl09g00283 297 Gene3D Ribonuclease Inhibitor 9 130 IPR032675 -
Eupl09g00283 297 SUPERFAMILY L domain-like 17 121 - -
Eupl09g00283 297 SUPERFAMILY Protein kinase-like (PK-like) 213 275 IPR011009 -
Eupl09g00283 297 ProSiteProfiles Protein kinase domain profile. 229 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00283 297 PANTHER OS07G0107800 PROTEIN-RELATED 10 275 - -
Eupl09g00283 297 PRINTS Leucine-rich repeat signature 100 113 - -
Eupl09g00283 297 PRINTS Leucine-rich repeat signature 79 92 - -
Eupl09g00283 297 Pfam Leucine rich repeat 57 113 IPR001611 GO:0005515
Eupl09g00283 297 FunFam Leucine-rich repeat receptor-like kinase 10 140 - -
Eupl09g00283 297 Pfam Protein tyrosine and serine/threonine kinase 231 276 IPR001245 GO:0004672|GO:0006468
Eupl09g00283 297 Gene3D Phosphorylase Kinase; domain 1 202 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00283 Eupl-Chr9 8563609 8566808 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00283 13 274 Receptor kinase-like Gene Family AT1G05700 45.907 9.36e-75 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Eupl09g00283 LRR_8 3.7e-09 CL0022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00283 - - nnu:104588225 280.411