Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00277 ATGGCGGCAACGCCGATGATGCCGCCAAATCCGGCTGCCGGAAACCCTAATTTCGACGGGAATCCGCCGGCGCCACCACCTCCGGGGACGGACATGACGGGAATATGTTTTCGCGATCAGCTATGGCTGAATTCGTACCCTCTGGATCGAAATCTCGTCTTCGATTACTTCGCTTTATCTCCTTTCTACGATTGGAGCTGCAACAATGAGCAGCTTAGGATGCGATCGATTCACCCTCTCGACATCTCACATCTCTCGAAAATGACGGGCACTGAATACATGCTGAATGAAGTTATGGAGCCCCACCTCTTTGTGATCCGGAAGCAAAAGAGAGATGGTCCCGAGAAAGTCACACCCATGCTCACTTATTATGTCCTAGATGGTTCAATTTACCAAGCGCCTCAGCTTTGCAATGTCTTTGCAGCCAGAATTGGACGGGCTCTTTATCATATATCAAAGGCTTTCACGACTGCTGCATCAAAGTTGGAGAAGATTGGATTTGTTGACGGGGAAAATGAAAGTGCTGCCTTTGAAACAAAGGTTGTAAAAGAGACAATTGATTTTAAGGAAGTCAAACGAGTGGACCACATTCTTGCATCATTACAACGCAAGCTCCCACCAGCCCCTCCACCACCGCCATTTCCAGAAGGCTATGCTCCTCCGACGACCTCTGAAGCAGATAAAGGCCCAGAAAACCAGCAACCGGCTGATTCACAACTTCCTCCTATAGATCCTATCATTGACCAAGGTCCATCTAAACGGATAAAATTTTAA 774 0.4793 MAATPMMPPNPAAGNPNFDGNPPAPPPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWSCNNEQLRMRSIHPLDISHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRALYHISKAFTTAASKLEKIGFVDGENESAAFETKVVKETIDFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPPTTSEADKGPENQQPADSQLPPIDPIIDQGPSKRIKF* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00277 257 Gene3D Mediator complex, subunit Med6 29 158 IPR038566 -
Eupl09g00277 257 FunFam Mediator of RNA polymerase II transcription subunit 6 29 158 - -
Eupl09g00277 257 MobiDBLite consensus disorder prediction 9 30 - -
Eupl09g00277 257 MobiDBLite consensus disorder prediction 204 219 - -
Eupl09g00277 257 MobiDBLite consensus disorder prediction 1 30 - -
Eupl09g00277 257 PANTHER MED-6-RELATED 17 257 IPR007018 GO:0003712|GO:0006357|GO:0016592
Eupl09g00277 257 Pfam MED6 mediator sub complex component 35 160 IPR007018 GO:0003712|GO:0006357|GO:0016592
Eupl09g00277 257 PIRSF MED6_meta/plant 21 257 IPR016820 GO:0003712|GO:0006357|GO:0016592
Eupl09g00277 257 MobiDBLite consensus disorder prediction 202 257 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Eupl09g00277 Med6 2.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00277 K15128 - csin:114262897 415.231