Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00259 ATGAATAAGAGTCATATAGGCTCCATCAGCAGTTCTGATCTTATCGATGCAAAGCTTGAAGAGCATCAGATGTGTGGGTCCAAGCAGTGCCCTAGTTGTGGACACAAGCTAGAACAAAAACCGGACTGGTTAGGCCTTCCAGCAGGAGTGAAGTTTGATCCAACAGACCAAGAACTGATAGAGCATCTTGAAGCGAAGGTTGAAGCTAAAGATTCAAAATCCCATCCTTTGATAGATGAGTTCATCCCTACCATTGAAGGAGAAGATGGGATTTGCTATACTCATCCTGAAAGACTTCCAGGGGTGACAAGAGATGGTCTAAGCAGGCACTTCTTCCATAGACCCTCCAAGGCCTACACAACTGGAACAAGAAAGAGAAGAAAAATACAAACAGAATGCGATCTGCAAGGTGGTGAGACCCGGTGGCACAAAACTGGTAAGACAAGACCAGTAATGGTGAATGGAAAACAAAAAGGGTGCAAGAAGATCTTAGTCCTTTATACCAACTTCGGCAAACATCGAAAACCCGAAAAAACCAACTGGGTCATGCACCAATACCACTTGGGTCAGCATGAAGAAGAAAAAGAAGGAGAGCTGGTTGTATCAAAGATATTCTATCAAACACAACCCAGACAATGCAATTGGTTGGAAAGAAGTACAACCACCGGTGAGGGAAGCGTCGACCCGAATAGTAGAAGAGAGAGTGGTAGTGGGAGCTGTTCTTCTTCTAAAGAAATCAGTACCCAAAGAGATGAATTTTCTTCTGCTGGAGCTGGAATTTCAAGTTACAGTGCCATGGATATTAATCACATGAAATCTGATCATTTCAGCTTTGCCCCATTCAGGAAAAGCTTTGATGAGGTAGGAATGGGAGAAGCTTCAAAGGCAAGAGATGCTTCAGCACCTCGCACGTGTGAGGAGCATGAAGAGCTTGAGCACCCAAGGCCACATCACGTGACCCATGAGCAGCAGCAACAACAACAACAACAACATTATCATCAGGTGGCAACTGAAGCTTTCCATGTCAGCAGGCCTTCACATCCCATCTCTACCATCATTTCTTCTCCTCCCCTCCATCACACCTCCATTGTTCTTGATGAAGATTCCTATCATGTCTCAAGAATAATCCTCCAAAATGAAAAATTTCAGCAGCATCAGCAACAACAACAACAACAGCAGCATAACTTGGGAGGAAGATCTGGTTCAGGTTTGGAGGAACTAGTGATGAGTTGCACTTCAGATGACATCAAAGAAGAGTCGCCCATCACAAACCCACAAGAGGCAGACTGGCTAAAGTACACCTACTGGAATGACCCTGACAACCCGAATCATCATGGGTAG 1341 0.4467 MNKSHIGSISSSDLIDAKLEEHQMCGSKQCPSCGHKLEQKPDWLGLPAGVKFDPTDQELIEHLEAKVEAKDSKSHPLIDEFIPTIEGEDGICYTHPERLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKHRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWLERSTTTGEGSVDPNSRRESGSGSCSSSKEISTQRDEFSSAGAGISSYSAMDINHMKSDHFSFAPFRKSFDEVGMGEASKARDASAPRTCEEHEELEHPRPHHVTHEQQQQQQQQHYHQVATEAFHVSRPSHPISTIISSPPLHHTSIVLDEDSYHVSRIILQNEKFQQHQQQQQQQQHNLGGRSGSGLEELVMSCTSDDIKEESPITNPQEADWLKYTYWNDPDNPNHHG* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00259 446 Gene3D NAC domain 55 211 IPR036093 GO:0003677|GO:0006355
Eupl09g00259 446 FunFam NAC domain-containing protein 73 55 211 - -
Eupl09g00259 446 MobiDBLite consensus disorder prediction 290 331 - -
Eupl09g00259 446 MobiDBLite consensus disorder prediction 290 320 - -
Eupl09g00259 446 SUPERFAMILY NAC domain 41 207 IPR036093 GO:0003677|GO:0006355
Eupl09g00259 446 MobiDBLite consensus disorder prediction 216 255 - -
Eupl09g00259 446 MobiDBLite consensus disorder prediction 381 403 - -
Eupl09g00259 446 ProSiteProfiles NAC domain profile. 46 207 IPR003441 GO:0003677|GO:0006355
Eupl09g00259 446 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 10 383 IPR044799 GO:0003700
Eupl09g00259 446 Pfam No apical meristem (NAM) protein 47 188 IPR003441 GO:0003677|GO:0006355
Eupl09g00259 446 MobiDBLite consensus disorder prediction 381 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00259 Eupl-Chr9 7960941 7967781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00259 10 437 NAC Transcription Factor Family AT5G56620 52.876 3.09e-132 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl09g00259 DUF936 8.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00259 - - vvi:100261063 730.324