Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00256 ATGATAAAGATAGTGTTTCTGAAAGACAGATTGTTCGAGTCGGACGCAAAGAGAGCGTTAGTTGGAGCGGGAGCGCGGATTCTTTTCTATCCGACTCTTCTGTACAATGTCTTTCGGAACAAGATTGAGGCCGAGTTCCATTGGTGGGACGAAGTTGATCAGTATCTTTTGTTGGGTGCCGTTCCATTTCCTAAGGATGTTCTGCGGTTGAAGCAGATTGGAGTTGGGGGTGTCATAACCCTCAATGAACCTTATGAGACTTTGGTTCCATCATCCTTATACCATGCTCATGGGATCGACCACCTGGTGATTCCCACAAGAGATTACCTATTCGCCCCTTCTTTTGTGGATATTAGCCGAGCTGTGCATTTCATTCACAAGAATGCATCCTGTGGGAGAACTACTTATGTCCACTGTAAAGCTGGGCGGGGTAGGAGCACTACCATTGTCCTCTGCTATTTGGTGGAGTATAAGCATATGACACCTGCTGCTGCTCTGGAACATGTGCGGTCCAGAAGACCTCGAGTGCTCTTAGCTCCCTCACAGTGGAAGGCAGTTCAAGAGTATGGAATGTGCAGACCAAATTTGACTGCAAGCTCTTCCTCAGGGGATGAAGTTCTGATAACAAAGGCTGATCTTGAAGGGTATTACAGCACTCGTTGTGATGCTAGGAAGGAGCTGAGTGTTGTTCGCAAGGCAGTGAGAGGTGGGCCTATGATAGCAAGGCTATCTTGCCTCTTTGCATCCTTGAAACTTTCTGGTAGTCGCTCTGGAGTCGCTGCCCGGCTGCCCGAGATACGTGCTTGTTAA 810 0.4815 MIKIVFLKDRLFESDAKRALVGAGARILFYPTLLYNVFRNKIEAEFHWWDEVDQYLLLGAVPFPKDVLRLKQIGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAPSFVDISRAVHFIHKNASCGRTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALEHVRSRRPRVLLAPSQWKAVQEYGMCRPNLTASSSSGDEVLITKADLEGYYSTRCDARKELSVVRKAVRGGPMIARLSCLFASLKLSGSRSGVAARLPEIRAC* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00256 269 ProSitePatterns Tyrosine specific protein phosphatases active site. 137 147 IPR016130 GO:0016311|GO:0016791
Eupl09g00256 269 SMART dsp_5 51 192 IPR020422 GO:0006470|GO:0008138
Eupl09g00256 269 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 42 189 IPR029021 -
Eupl09g00256 269 CDD PTPMT1 48 189 IPR044596 GO:0004721
Eupl09g00256 269 FunFam Dual specificity phosphatase domain protein 48 195 - -
Eupl09g00256 269 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 116 184 IPR000387 GO:0016311|GO:0016791
Eupl09g00256 269 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 12 248 - -
Eupl09g00256 269 ProSiteProfiles Dual specificity protein phosphatase domain profile. 48 195 IPR020422 GO:0006470|GO:0008138
Eupl09g00256 269 Pfam Dual specificity phosphatase, catalytic domain 92 190 IPR000340 GO:0008138|GO:0016311
Eupl09g00256 269 Gene3D Protein tyrosine phosphatase superfamily 48 192 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00256 Eupl-Chr9 7896871 7903892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00256 17 258 Protein tyrosine phosphatase (PTP) family AT2G35680 54.255 4.67e-97 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00256 - - nnu:104588254 430.254