Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00241 ATGGGGAACAAGATCGCGCGCACAACACAGGCCTCAGCATCGGAGTATTACCTCCACGACCTTCCTTCCTCATACAACCTTGTCCTGAAAGAGGTTCTTGGCCGCGGCCGTTTCTTCAAATCCATACAGTGCAAGCACGATGAAGGCCTCGTCCTCGTCAAAGTCTACTTCAAGCGCGGTGACTCCATCGATCTCAAAGAATACGAGCGTCGTTTGTTCCAAATCAGAGACATCTTCCGTTCCCTCCAACACCCTCACGTCTGGCCTTTCCAATATTGGCTTGAAACGGACAAAGCTGCTTACCTTCTCCGACAGTATTTCCTTAACAATCTTCACGATCGATTGAGTACTCGCCCGTTTCTCAATCTCGTTGAGAAGAAATGGTTAGCTTTTCAGTTACTCTATGCAGTGAAACAGAGCCACGAGAATGGGGTTTGTCATGGTGATATTAAGTGTGAGAATGTTCTGGTCACGTCTTGGAATTGGCTTTACCTTGCTGATTTTGCGTCGTTTAAGCCGACTTATATACCTCATGATGACCCTTCGGATTTCTCGTTTTTCTTCGACACTGGAGGGAGGAGGAGATGTTATCTCGCACCTGAGAGATTTTATGAGCATGGAGGTGAGATGCAAGTTGCACCAGATGCACCTTTAAGGCCATCTATGGACATCTTCTCGGTAGGGTGTGTTATTGCAGAGCTTTTCCTCGAGGGGCAACCTTTGTTTGAACTATCCCAGCTACTTTCTTATCGCAGAGGGCAACATGATCCCAGCCAATACCTTGAAAAGATCCCGGATTGTGGAATCCGCAAGATGATTCTTCATATGATTCAGCTGGATCCAGAGTCACGACTATCTGCTGAAGGCTACTTGCAGAGCTATGCATCTGTTGTCTTTCCTAGCTACTTCTCACCATTTCTTCATAATTTCTTTTCCTGCTTGATTCCTCTTGATTCTGATACAAGGGTTGCAGTGACACAGAGCGCTCTCCATGATATACATAAGCAAATGATGAGCAATAGATCAAGTGAGGAAATAGGTATTATATCACGCACATCTTCCAACTCCAAAAGTGATGAGCCTTTCCAACAGATTGACAATGCAGAACAAAACTTAAATTTGCGGAAGGACTCCTTGAGAAAGAGAGGAGAGCTAGAGAAAGGTCTGTTCGGTGATCAGTTTCAACTTCTTGGTGATATCACAACCCTCCTTAAGGATGTAGAACAAAGTAGTCATTGTTCTAATAGTAAGCAGATGCTTGAAAATGTGCCTAGTGATGCTTTTGGCTCTTCTGATGCAAGTTGCTCTGCATATCCCCAAAATCCCAGGCACTCTGGCAAGAAATCTCCAGGCGAGCTTCGCAAAACTATTTCGAAGGGATTTAAAGGGAATGATTTCCCTTTTTTGAGAAGAATTATTAAGAGTGATTTAAATTCATTGATGTCTGAGTACGACAGCCAGTCAGATACTTTTGGAATGCCTTTTTTTCCTGTACCCCAACATAATATGAGCTGTGAAGGTATGGTCCTGATTGCATCGCTGTTGTGTTCCTGCATACGCAGTGTCAAGTTGCCACAGTTGAGGAGGGGTGCTGTACTCCTACTGAAGGCTTGTTCCTTGTACATCGATGACGAAGATCGCTTGCAGCGTGTGTTTCCCTATGTTATTGCGATGCTTTCTGATTCCGCAGCAATAGTGCGTTGTGCTGCCTTGGAGACTTTGTGTGACATTCTGCCATTAGTTAGAGATTTCCCTCCCAGCGATGCCAAAATTTTTCCTGAGTATATTCTTCCGATGCTCTCTATGCTTCCAGATGATACAGAAGAAAGTGTGCGGATTTGTTATGCCAGCAATATTTCCAAGCTTGCACTAACTGCTTATCGATTCTTGATTCAGTCACAAAGCTTAACTGAGGCGGGGGTTCTTGACAAATCGAGTCCACCCCCAAAATCGTCAAGTCCCTCTGTTGAGACATCAAGACAGCTGAAGAGTGAGAGTAGTGATGCACAGCTTGTACAGTTGAGGAAGTCCATCGCAGAGGTTGTTCAAGAAATGGTGATGGGTCCAAAGCAGACTCCGAATATCAGAAGAGCTCTCCTGCAGGACATTGGCAACCTATGTTGCTTCTTTGGCCAGAAGCAGAGTAACGACTTTCTGTTACCCATTTTACCGGCTTTTCTAAATGATCGAGATGAGCAGCTAAGGGCCGTTTTCTATGGGCAGATTGTGTTTGTCTGCTTCTTTGTGGGTCAAAGAAGTGTGGAGGAATACCTTTTACCCTATATTGAGCAGGCCTTGAGTGATACAACAGAGGCTGTCATTGTTAATGCATTGGAATGCTTGGCCATGCTGTGCAAAAGCAGTTTCTTGCGGAAAAGGATATTGCTTGAAATGATTGAGCGTGCTTTCCCATTGCTATGCTATCCTAGTCAGTGGGTAAGAAGGTCAGTTGTAACTTTTATTGCAGCTAGTAGCGAGAGTTTAGGTGCAGTGGACTCCTATGTTTACCTAGCTCCGGTAATACGCCCTTTCCTCCGCAGACAACCGGCATCTCTAGCTTCAGAGAAATCTCTCCTTACGTGTCTCAAGCCTCCGGTCTCGAGGCAGGTATTCTACCAAGTCTTAGAAAATGCCAGGAGTTCAGACATGTTGGAGAGACAGAGAAAGATATGGTACAATTCGTCTCCGCAGTCGAAGCAATGGGAATCTGTGGACTTGAATAAGAGAGGAACGACAGAATTAAATCCCATGAAGAGCTGGGCTGGCAAACAACTGGATCTGCAGGGTCACAAACCTATCAGCAGTGCCATGCTGGGGCTACCTGATGCTGAGGATGGTGAGGCTAAGTTGAGAGCAATGGGAAGCTTCATGCACAATGCGTCGAGTACAATTGACATTCGAGATCCTTTATGCTCGGAGAAGTTGCAGTTTTCTGGCTTCATTTCCCCACATGTTAGCGGTGGAAACAGTTTCAATTGTGATGGATCATCGGAAGGCATACCTTTTTACTCTTTTAGCATGGATAAGCAAGCAGTGGGTGCTACCTCTGCAGGATCCGATTCTCCATCTCAAGGGACCTCCCTAGGAATCAGTTCATCATCCATGCCTTGGATAGATCCGGTTAATAAATCGTTTGGTTTGGCTAGTTCAGTTGTAGCACCTAAGCTTGTTTCAGGATCCTTCAGCATTAGTAACAGTTCTAAGCAGTTCTACAAAGTTGTGCGGGATGCAGAAGGCAGAGAAAACGACCAAACTGCTTATATCAGCAGCAAGTTTCAAAACATGGGTATCTCTGGCACCCTAAAAGGAAGCTCATCTATAACTGTGGAAGATGCACCCTCACCAACTGATGTAACCGGATTGCCATCTTTTGCCCGAGCATCATCAGTCCCAGACACAGGGTGGAGGCCTCGTGGGGTGCTTGTGGCACATCTCCAGGAGCACCGTTCTGCTGTCAATGACATTGCCATTTCAAACGACCATAGTTTTTTCGTGAGTGCATCTGATGATTCAACTGTAAAGGTATGGGATACCAGAAAGTTGGAGAAGGACATCTCCTTCAGGTCGAGGCTGACTTACCCTCTAGATGGAAGCCGGGCACTGTGCGCTGCAATGCTCCGGGGCTCTGCACAAGTTGTTGTTGGAGCATGTAATGGCACAATACACATGTTCTCTGTTGATTACATCTCCAGAGGTTTGGGCAGTGTTGTTGAGAAATACTCAGGTATTGCAGACATTAAAAAGAGGGAGGTTGGGGAAGGTGCCATTCTCAGCCTGTTGAACTGTTCTTCAGATGGCTGTCCCAGTCAGACAGTTATGTACAGCACTCGAAGTTGTGGGATCCATCTCTGGGATACAAGGGCAAATTCAATGGCATGGACGTTGAAAGCAAATCCTGAAGAGGGCTACGTTTCTTCTCTGGTAACTGGTCCTTGTGGGAATTGGTTTGTGTCAGGGTCTTCTAGGGGTGTGCTTACTCTTTGGGATCTCAGATTCCTTGTACCTGTTAACTCATGGCAGTATTCTCTGGTATGCCCTATAGAGAAAATGTGTCTACTCACCCCCCCTCCAAATGCATCCATGTCTGCTACAGCAAGGCCCCTGGTTTATGTTGCTGCAGGTTGTAATGAAGTTTCCCTCTGGAATGCAGAGAATGGAAGTTGCCACCAGGTATTGAGACTTGCAAACAATGATAGTGATGCTGAAATGTCTGACCTGCCTTGGGCCTTAGCCAGGCCTTCAAGCAAATCCAATCCTAAACTAGATCTGAGACGGAATATCAATCCAAAGTATCGAGTCGATGAGTTGAATGAACCTCCACCACGTCTTCCTGGTATCCGTTCATTGCTTCCCTTACCTGGGGGAGATTTGTTAACTGGGGGAACCGATTTGAAGATCCGACGCTGGGACCATTTCAGTCCTGATCGCAGTTACTGTGTTTGTGGGCCATCGTTAAAGGGAATGGGAAATGATGAGCTGTATGAAACTAGATCTAGTTTTGGGGTGCAAGTTGTGCAGGAGACAAAAAGGCGACCTCAGGCAACCAAGCTGACGCCAAAGGCGCTCCTTGCAGCCGCTGCCACTGATTCCGCAGGTTGTCACCGGGATTGTATACTCTCCCTGGCTTCTGTAAAGTTGAACCAGAGGCTCCTGATATCAGGCAGTAGAGATGGTGCTATCAAGGTGTGGAAGTAA 4695 0.4616 MGNKIARTTQASASEYYLHDLPSSYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDSIDLKEYERRLFQIRDIFRSLQHPHVWPFQYWLETDKAAYLLRQYFLNNLHDRLSTRPFLNLVEKKWLAFQLLYAVKQSHENGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPHDDPSDFSFFFDTGGRRRCYLAPERFYEHGGEMQVAPDAPLRPSMDIFSVGCVIAELFLEGQPLFELSQLLSYRRGQHDPSQYLEKIPDCGIRKMILHMIQLDPESRLSAEGYLQSYASVVFPSYFSPFLHNFFSCLIPLDSDTRVAVTQSALHDIHKQMMSNRSSEEIGIISRTSSNSKSDEPFQQIDNAEQNLNLRKDSLRKRGELEKGLFGDQFQLLGDITTLLKDVEQSSHCSNSKQMLENVPSDAFGSSDASCSAYPQNPRHSGKKSPGELRKTISKGFKGNDFPFLRRIIKSDLNSLMSEYDSQSDTFGMPFFPVPQHNMSCEGMVLIASLLCSCIRSVKLPQLRRGAVLLLKACSLYIDDEDRLQRVFPYVIAMLSDSAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDTEESVRICYASNISKLALTAYRFLIQSQSLTEAGVLDKSSPPPKSSSPSVETSRQLKSESSDAQLVQLRKSIAEVVQEMVMGPKQTPNIRRALLQDIGNLCCFFGQKQSNDFLLPILPAFLNDRDEQLRAVFYGQIVFVCFFVGQRSVEEYLLPYIEQALSDTTEAVIVNALECLAMLCKSSFLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVYLAPVIRPFLRRQPASLASEKSLLTCLKPPVSRQVFYQVLENARSSDMLERQRKIWYNSSPQSKQWESVDLNKRGTTELNPMKSWAGKQLDLQGHKPISSAMLGLPDAEDGEAKLRAMGSFMHNASSTIDIRDPLCSEKLQFSGFISPHVSGGNSFNCDGSSEGIPFYSFSMDKQAVGATSAGSDSPSQGTSLGISSSSMPWIDPVNKSFGLASSVVAPKLVSGSFSISNSSKQFYKVVRDAEGRENDQTAYISSKFQNMGISGTLKGSSSITVEDAPSPTDVTGLPSFARASSVPDTGWRPRGVLVAHLQEHRSAVNDIAISNDHSFFVSASDDSTVKVWDTRKLEKDISFRSRLTYPLDGSRALCAAMLRGSAQVVVGACNGTIHMFSVDYISRGLGSVVEKYSGIADIKKREVGEGAILSLLNCSSDGCPSQTVMYSTRSCGIHLWDTRANSMAWTLKANPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSLVCPIEKMCLLTPPPNASMSATARPLVYVAAGCNEVSLWNAENGSCHQVLRLANNDSDAEMSDLPWALARPSSKSNPKLDLRRNINPKYRVDELNEPPPRLPGIRSLLPLPGGDLLTGGTDLKIRRWDHFSPDRSYCVCGPSLKGMGNDELYETRSSFGVQVVQETKRRPQATKLTPKALLAAAATDSAGCHRDCILSLASVKLNQRLLISGSRDGAIKVWK* 1565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00241 1564 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00241 1564 MobiDBLite consensus disorder prediction 640 669 - -
Eupl09g00241 1564 CDD STKc_Vps15 16 303 - -
Eupl09g00241 1564 SMART WD40_4 1436 1470 IPR001680 GO:0005515
Eupl09g00241 1564 SMART WD40_4 1288 1329 IPR001680 GO:0005515
Eupl09g00241 1564 SMART WD40_4 1524 1564 IPR001680 GO:0005515
Eupl09g00241 1564 SMART WD40_4 1138 1177 IPR001680 GO:0005515
Eupl09g00241 1564 SMART WD40_4 1186 1225 IPR001680 GO:0005515
Eupl09g00241 1564 ProSiteProfiles Trp-Asp (WD) repeats profile. 1145 1186 IPR001680 GO:0005515
Eupl09g00241 1564 ProSiteProfiles Protein kinase domain profile. 27 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00241 1564 FunFam Protein kinase family protein / WD-40 repeat family protein 648 857 - -
Eupl09g00241 1564 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1145 1179 - -
Eupl09g00241 1564 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00241 1564 Gene3D Transferase(Phosphotransferase) domain 1 23 387 - -
Eupl09g00241 1564 Gene3D - 1355 1564 IPR015943 GO:0005515
Eupl09g00241 1564 ProSiteProfiles Trp-Asp (WD) repeats profile. 1547 1564 IPR001680 GO:0005515
Eupl09g00241 1564 MobiDBLite consensus disorder prediction 431 453 - -
Eupl09g00241 1564 Pfam WD domain, G-beta repeat 1141 1177 IPR001680 GO:0005515
Eupl09g00241 1564 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1531 1564 - -
Eupl09g00241 1564 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1564 IPR045162 GO:0004674|GO:0016236|GO:0045324
Eupl09g00241 1564 SUPERFAMILY WD40 repeat-like 1142 1562 IPR036322 GO:0005515
Eupl09g00241 1564 Gene3D - 1186 1354 IPR015943 GO:0005515
Eupl09g00241 1564 Gene3D - 503 641 IPR011989 -
Eupl09g00241 1564 Gene3D - 690 853 IPR011989 -
Eupl09g00241 1564 FunFam Phosphoinositide 3-kinase regulatory subunit 4 1122 1186 - -
Eupl09g00241 1564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Eupl09g00241 1564 FunFam Protein kinase family protein / WD-40 repeat family protein 24 348 - -
Eupl09g00241 1564 Gene3D - 1103 1185 IPR015943 GO:0005515
Eupl09g00241 1564 Pfam HEAT repeat 552 579 IPR000357 GO:0005515
Eupl09g00241 1564 SUPERFAMILY Protein kinase-like (PK-like) 26 293 IPR011009 -
Eupl09g00241 1564 FunFam phosphoinositide 3-kinase regulatory subunit 4-like 497 636 - -
Eupl09g00241 1564 SUPERFAMILY ARM repeat 505 845 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00241 Eupl-Chr9 7708862 7722548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00241 29 297 MAP Kinase Gene Family AT2G01450 24.765 2.89e-12 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Eupl09g00241 Pkinase 4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00241 K08333 - nnu:104604470 2594.3