Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00238 ATGTTGAATTTTAGACATACTTTGTGCATTATATTCTTCATTCTCCTCCTAAATTCAAGCCTAATTCAATGCCACACCAAAGGAATCCGACCGAAGAAGACGGCCGGGAAGCGCTTATCGACGAATATGACACAAACCCAATTTGCAGAACAGCAATTCATGAAGTGGGTCAGATTTGTTGGGAGGCTGAGACACTCCCTCTTCACTACAGCAATGAACAAGCTCTTCCCTTCTTATACTCTTAATGTCAATAAGAATCCGGCATCCGGAGAATTTACTTCGATTCAAGCCGCCATAGATTCGCTTCCATTCATTAATCTTGTTAGAGTTGTCATCAAGGTCCATGCAGGTGTCTATAAGGAGAAGGTGAATATCCCACCATTGAAGTCTTTCATAACCATCCATGGAGCAGGAGCAGATAAGACAATTGTGCAATGGGGAGATACAGCTCAGACAATTGGAGCAGGAGGGAAGCCTATTGGAACATTCAGCTCTGCAACTTTTGCTGTGAATTCAGCTTATTTCATAGCCAAGAACATCACATTTAAGAACACAACACCACTTCCACCACCAGGAGCAGTTGGAAAGCAAGCAGTGGCATTTAGAATATCAGGAGATACAGCAGCTTTTTTGGGTTGTAGGTTCTTGGGTGCTCAAGATACACTGTATGATCATCTGGGTAGGCACTACTACAAAGATTGCTACATTGAAGGCTCTGTGGATTTCATTTTTGGCAATGGCCTCTCACTATTTGAGGGATGCCATGTTCATGCAATAGCACAGAACTATGGGGCCCTGACAGCCCAGGGCAGGAGGAGCCTTTTGGAGGACACAGGGTTCTCATTTGTAAACTGTAGGGTCACGGGGTCAGGAGCTCTCTACCTTGGCAGGGCGTGGGGAACCTTCTCTACGGTTGTCTTTGCCTACACATATATGGACGACATTATCATTCCCAGAGGCTGGTACAATTGGGGAGATCCTAGCAGGGAAATGACTGTGTTCTATGGACAGTACAAATGTACTGGGCCTGGAGCAAGCTATGCAGGAAGAGTTTCATGGGCAAGAGAATTGACTGATGCGGAGGCCAAGCCTTTTATTTCATTGAGCTTCATTGATGGGTTAGAGTGGATCAAATTGTGA 1140 0.45 MLNFRHTLCIIFFILLLNSSLIQCHTKGIRPKKTAGKRLSTNMTQTQFAEQQFMKWVRFVGRLRHSLFTTAMNKLFPSYTLNVNKNPASGEFTSIQAAIDSLPFINLVRVVIKVHAGVYKEKVNIPPLKSFITIHGAGADKTIVQWGDTAQTIGAGGKPIGTFSSATFAVNSAYFIAKNITFKNTTPLPPPGAVGKQAVAFRISGDTAAFLGCRFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNGLSLFEGCHVHAIAQNYGALTAQGRRSLLEDTGFSFVNCRVTGSGALYLGRAWGTFSTVVFAYTYMDDIIIPRGWYNWGDPSREMTVFYGQYKCTGPGASYAGRVSWARELTDAEAKPFISLSFIDGLEWIKL* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00238 379 Gene3D - 78 379 IPR012334 -
Eupl09g00238 379 FunFam Pectinesterase 77 379 - -
Eupl09g00238 379 Pfam Pectinesterase 88 373 IPR000070 GO:0030599|GO:0042545
Eupl09g00238 379 SUPERFAMILY Pectin lyase-like 77 378 IPR011050 -
Eupl09g00238 379 ProSitePatterns Pectinesterase signature 2. 236 245 IPR033131 -
Eupl09g00238 379 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 76 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00238 Eupl-Chr9 7654716 7659092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00238 1 377 Carbohydrate Esterase AT5G47500 44.180 1.75e-105 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00238 K01051 - ming:122059656 681.404