Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00237 ATGGGGAGAGCGACGAGATGGTTGAGGGGCTTGTTGGGGATGAAGAAAGAGAAGGAACATAAAGAGAATTCGAATTCCGGCGTCCGGAAAGAGAAGAAAAGGTGGAGTTTTGGTAAGTCTGGGAGGGATTCAGGCGGCGTGGGTCAGATCCCGACTGCTATTCCAGCGAGTAAGCCGGAACCTGAGGCTACTTGGACGAGGTCTTATTACACTGAGACAGAGAGCGAGCAGAACAAGCATGCAATTGCGGTTGCTGCAGCAACCGCAGCTGCAGCTGATGCTGCCGTCGCTGCGGCGCAGGCGGCTGTGGCCGTTGTGAGGCTTACAAGCCAGGGCAGAGGGACGATGTTTGGTGGGGGACAAGAGAGATGGGCTGCAGTGAAGATTCAGACGGTTTTTCGGGGATATTTGGCAAAGAAAGCCCTTCGAGCACTAAAAGGACTAGTGAAGTTACAAGCTCTTGTTAGAGGTTATCTAGTTCGTAAACAAGCTACTGCAACTCTTCATAGTATGCAAGCTCTTATAAGAGCTCAGGCGACGATCCGATCGCAGAAAGCTCGTCGTTTCCTCAATAAAGATAACAGATTTCAGCCAGAATTCCGTCCACGTAAATCTATTGAAAGATTTGATGACACAAGAAGCGAGCACATTGCATCAATCCACAGTAGGAGACTATCAGCTTCCCTTGAGGCAGCTATCAATACATTCGAGGAGAGCCCAAAGATTGTCGAAATCGATACGTGCAGGCCGAAGTCACGATCCCGTAGAACCAACACTTCAATGTCGGATTCCGGCGAAGACCCACTTTACCAAATGCATTCCACTCCCTTTCCATGCCACATTCCAGCTCGTTTATCCATACCGGATTGCCGGAATTTCCCCGATTATGATTGGGGCTTCACGGGCGACGAATGTAGGTTCTCCACAGCTCAAAGCACCCCACGGTTTGTGAATTCTACTGGATCGAATGCACCTGTCACACCTGCTAAGAGTGTCTGTGCCGACAGCTTCTTCCGGCGATACTCAAATTACCCGAATTACATGGCGAACACACAATCGTTTAGGGCGAAGTTAAGGTCTCACAGCGCTCCGAAACAAAGGCCAGAGCCAGGGTCGAAGAAGAGGCTTTCATTGAATGAAATAGTGGAGTCGAGGGCTAGTTTAAGTGGCGTAAGGATGCAACGATCTTGTTCTCAAGCTCAAGAAACCATCAATTTTAAGAATGTTGTGATGGGTAGGCTTGATAGATCTGCTGAATTTGTTAGAGAAGTAGAGAGAGATCAGTTGCAGTTGCAGAGGAATTGGTGA 1308 0.4893 MGRATRWLRGLLGMKKEKEHKENSNSGVRKEKKRWSFGKSGRDSGGVGQIPTAIPASKPEPEATWTRSYYTETESEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGTMFGGGQERWAAVKIQTVFRGYLAKKALRALKGLVKLQALVRGYLVRKQATATLHSMQALIRAQATIRSQKARRFLNKDNRFQPEFRPRKSIERFDDTRSEHIASIHSRRLSASLEAAINTFEESPKIVEIDTCRPKSRSRRTNTSMSDSGEDPLYQMHSTPFPCHIPARLSIPDCRNFPDYDWGFTGDECRFSTAQSTPRFVNSTGSNAPVTPAKSVCADSFFRRYSNYPNYMANTQSFRAKLRSHSAPKQRPEPGSKKRLSLNEIVESRASLSGVRMQRSCSQAQETINFKNVVMGRLDRSAEFVREVERDQLQLQRNW* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00237 435 MobiDBLite consensus disorder prediction 254 269 - -
Eupl09g00237 435 ProSiteProfiles IQ motif profile. 122 150 IPR000048 GO:0005515
Eupl09g00237 435 Pfam Protein of unknown function (DUF4005) 318 396 IPR025064 -
Eupl09g00237 435 MobiDBLite consensus disorder prediction 10 39 - -
Eupl09g00237 435 PANTHER IQ-DOMAIN 5-RELATED 1 380 - -
Eupl09g00237 435 ProSiteProfiles IQ motif profile. 146 173 IPR000048 GO:0005515
Eupl09g00237 435 MobiDBLite consensus disorder prediction 9 63 - -
Eupl09g00237 435 Pfam IQ calmodulin-binding motif 149 163 IPR000048 GO:0005515
Eupl09g00237 435 Pfam IQ calmodulin-binding motif 123 143 IPR000048 GO:0005515
Eupl09g00237 435 Gene3D - 121 164 - -
Eupl09g00237 435 ProSiteProfiles IQ motif profile. 170 199 IPR000048 GO:0005515
Eupl09g00237 435 SMART iq_5 144 165 IPR000048 GO:0005515
Eupl09g00237 435 SMART iq_5 121 143 IPR000048 GO:0005515
Eupl09g00237 435 MobiDBLite consensus disorder prediction 249 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00237 Eupl-Chr9 7642750 7645915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00237 1 393 IQD Protein Family AT3G16490 54.680 8.19e-111 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00237 - - nnu:104604474 682.174