Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00230 ATGTCAGAGTATGCTTACACAACCAAAGTGAACGAGAAGATCGATGTTTATAGCTTCGGGGTGGTACTCCTAGAATTGACAACCGGAAGGGAAGCAAACGATGGAGATGAACATACCTGCCTTGCCGAATGGGCATGGCGTCACTTCCAAGAGGGCAACTCTATCATCGACAACCTTGACGAGGAGGTCAAGGAACCCTCTTACCTGGACGAAATGAGCGCAGTCTTCAAATTGGGGCTCATTTGTACTAGCACATTACCTTCCACTAGGCCTTCGATGAAGGAAGTGTTGCAAAACCTACTCAAATGTGGCCATCTGCAGGCCGGAGAGAAGAAAGCTGGGATCGATGATCCCCATAGTACTACTAGTAAATACCTCTCTAACTACAAGGGCAGCCAGCGTAAGAGAACCTCAGAGGATGATGATGATGATGATAGTTGGGCATGTAGTGTGTGA 456 0.4759 MSEYAYTTKVNEKIDVYSFGVVLLELTTGREANDGDEHTCLAEWAWRHFQEGNSIIDNLDEEVKEPSYLDEMSAVFKLGLICTSTLPSTRPSMKEVLQNLLKCGHLQAGEKKAGIDDPHSTTSKYLSNYKGSQRKRTSEDDDDDDSWACSV* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00230 151 SUPERFAMILY Protein kinase-like (PK-like) 3 99 IPR011009 -
Eupl09g00230 151 MobiDBLite consensus disorder prediction 109 151 - -
Eupl09g00230 151 Pfam Protein tyrosine and serine/threonine kinase 5 100 IPR001245 GO:0004672|GO:0006468
Eupl09g00230 151 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 3 102 - -
Eupl09g00230 151 Gene3D Transferase(Phosphotransferase) domain 1 2 126 - -
Eupl09g00230 151 ProSiteProfiles Protein kinase domain profile. 1 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00230 Eupl-Chr9 7504312 7504767 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00230 3 142 Receptor kinase-like Gene Family AT5G25930 54.286 2.71e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl09g00230 PK_Tyr_Ser-Thr 1.1e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00230 - - ming:122093637 192.2