Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00228 ATGTTATTTTCCTTGTTCATGATCAAACACTACCGGAGGAGAAAGCAAAGACAAGATCTTGCCAAGTGGAAGTTGACCTCGTTCCACAAGTTAGACTTCACTGAATCAAACATTTTAACCAGTTTAACTGAGAACAATCTGATTGGGAGTGGTGGGTCCGGGAAGGTTTACCGTGTTGCCGTTAATCGGTCAGGTGAATCGGTTGCTGTTAAAAAGATTTTTAATAAAGGAAAGTTAGATCATAACCTTGAGAAGCAATTTGAAGCAGAGGTTCAGATCTTGGGGACAATTCGACATTCGAACATAGTAAAATTGCTTTGTTGTATTTCGAGTGAGAGTTCGAAGCTTCTTGTTTACGAATACATGGAGAATTGTAGCTTAGATCGATGGCTCCATGGGAAGGAGAGGGGATCATTGATCTCTAGTTCAGTCCATCACGGCGTGTTGGATTGGCCTAGGAGGTTGCAGATTGCAATTGGAGCAGCCAAAGGACTTTGCTACATGCATCACGGTTTCTCTTCTTCGATCATTCATCGCGATGTGAAGTCGAGCAATATCCTATTAGATTCTGAGTTCAAGGCGAGGATTGCAGATTTTGGGCTAGCCAAGACGTTGGCTAAACAAGGGGAGGCTGATACAATGTCCGCTGTTGCTGGCTCTTTCGGATACATTGCTCCAGAGTATGCTTACACGACCAAAGTGAACGAGAAGATCGATGTTTATAGCTTCGGAGTGGTACTCCTGGAATTGACAACCGGACGGGAAGCAAACAAAGGAGATGAACATACATGCCTTGCCGAATGGGCATGGCGTCACTTTCAAGAGGGCAACTCTATCATCGACAACCTCGACGAGGAGGTCAGGGAACCCTCTTACCTAGACGAAATGAGTGTGGTCTTCAAATTGGGGCTCATTTGTACTGGCACATTACCTTCCACTAGGCCTTCCATGAAGGAAGTGTTGCAAATTCTACTCAAATGTGGCCATCTGCAGGCCGATGGAGAGAAGAAGGCCGGGATCGACAATGATGTCGATCCCCTCCTCAGTACTACTTGTAAATACCTCTCTAACTACAAGGGCAGCCGAAGTAAGAGAACCTCAGAGGATGATGATGACGATGATGATAGTTGGGCATGTAGTGTGTGA 1146 0.4529 MLFSLFMIKHYRRRKQRQDLAKWKLTSFHKLDFTESNILTSLTENNLIGSGGSGKVYRVAVNRSGESVAVKKIFNKGKLDHNLEKQFEAEVQILGTIRHSNIVKLLCCISSESSKLLVYEYMENCSLDRWLHGKERGSLISSSVHHGVLDWPRRLQIAIGAAKGLCYMHHGFSSSIIHRDVKSSNILLDSEFKARIADFGLAKTLAKQGEADTMSAVAGSFGYIAPEYAYTTKVNEKIDVYSFGVVLLELTTGREANKGDEHTCLAEWAWRHFQEGNSIIDNLDEEVREPSYLDEMSVVFKLGLICTGTLPSTRPSMKEVLQILLKCGHLQADGEKKAGIDNDVDPLLSTTCKYLSNYKGSRSKRTSEDDDDDDDSWACSV* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00228 381 Pfam Protein kinase domain 44 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00228 381 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 5 325 - -
Eupl09g00228 381 MobiDBLite consensus disorder prediction 359 381 - -
Eupl09g00228 381 Gene3D Phosphorylase Kinase; domain 1 24 121 - -
Eupl09g00228 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Eupl09g00228 381 SMART serkin_6 42 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00228 381 ProSiteProfiles Protein kinase domain profile. 42 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00228 381 ProSitePatterns Protein kinases ATP-binding region signature. 48 72 IPR017441 GO:0005524
Eupl09g00228 381 FunFam Receptor-like protein kinase HSL1 22 121 - -
Eupl09g00228 381 SUPERFAMILY Protein kinase-like (PK-like) 37 325 IPR011009 -
Eupl09g00228 381 Gene3D Transferase(Phosphotransferase) domain 1 122 345 - -
Eupl09g00228 381 FunFam Kinase family with leucine-rich repeat domain-containing protein 122 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00228 Eupl-Chr9 7487753 7488991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00228 1 371 Receptor kinase-like Gene Family AT5G25930 59.409 4.72e-149 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl09g00228 Pkinase 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00228 - K00924 ming:122093637 539.265