Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00223 ATGAAGCTTATTCAGAGATCTCTCTTGATTCCATTATTATTCTTCCTTAACCTACGCACTCTGTTTTCTTATCCTACGCCTCTGAATTGCTCAGACACCACTCGTCTCTGCACCTCCTTTCTCGCTTTCAAGCCGAATCAAAACCAAACCCTAGCTGTAATTCAAAGTATGTTCGATGTTCTACCGAACGATATAACAATCGAAGGGAACGGTCGTGATTATATCTTCATCAAGAAGAACTGCTCATGCGCTTCTCCGATCAAGAAGTATCTGACGAACACGACTTTCACGGTGAGGGAGGAGCAAGGATCGGTGTACCAGATGGTTAGGGAGGCCTACGGTGGGATCGCCTTTATGCCCAATTCGACACGGAGAGCGCGTGTGGGTGCGGTGGTATGGTTGCGACTCTTGTGCGGGTGTTCGAGTGGGTTGTGGAATTATTTTGTGAGCTATGTGATGGAAAATGGGGACTCGATCGAATCGCTGGCGAGTAGGTTTGGTGTTAGTATGGATAGCATCGAGACCGTTAATGGAATTGCTAATCCAGATAATGTCTCTGTTGGGGCGATGTATTACATACCGCTGAATTCAGTTCCTGGTGAGCCTTATCCTGTAGAGAAGGAGATTTCTCCCACTCCTGTTCCTGAGCCATCTGCTGACACTTTCACTGCACATCAAGTGAATCATAAGGCTCATTTTCCATATGGATGGATTATAGGGGGCTCGGGGGCTGGTCTAATTCTGATTTTTGTCACCATACTTGTATGTATTTCATTGAAGTCATCAATTTGTGGTGCCCAAGCCCAAGGGAGTCATGTGAAAGATCCTGATGGAAAGATCTCTCACAAGTTTCACATTCTTGGTAGGACAAGCTTCTGTTGTGCTTCAGGAAGGCCCCTCTGCTGCAAGTCTGTGGACTGGAAGCCGACCAATGGGGAGTCTAGCAACCGCCAAATAAATGTTCCCAAAGCCGTGGGGACTGATGTATTTGACATGGAGAAGCCTGTTGTTTTCAAATGTGAAGAAATTCTTTCTTCAACTGATTATTTCTCTGATTCAAATTTGCTTGGCCATGGGACATATGGTTCTGTGTATTATGCACTTCTTCGTGACCAGGAGGTTGCAATCAAAAGAATGACTGCTACAAAAACTAGGGAATTCATGGCAGAGATGAAAGTTCTCTGCAAAGTTCATCATGCAAGTTTGGTAGAACTGATTGGCTACGCAGCTAGTGATGATGAGCTATTTCTTATTTATGAGTATGCCCAAAAGGGTTCACTTGGAAGTCATCTACATGATCTTCAGAACAAGGGTAATACATCCCTTTCTTGGATTGTGAGGGTTCAAATTGCACTTGATGCTGCACGGGGTCTGGAATACATTCATGAGCACACCAAAACTCATTATGTCCACCGAGACATCAAAACAAGCAACATCTTACTTGACAGTGCCTTCAGGGCAAAGATTTCAGATTTTGGGCTAGCAAAACTTGTTGGAAAAACCAGTGAAGGAGAAGCTTCCACGACAAGAGTTGTAGGAACTTTTGGTTATTTGGCTCCAGAATATTTGAGTGATGGCCTAGCCACAACAAAAAGCGACGTTTATGCATTTGGTGTTGTTCTTTTTGAGCTAATATCAGGAAAAGACGCAACCACCCGAACTGAAGGCATGGTGTCGAAAAATGCTGAAAGACGCTCATTGGCATCTATTATGTTAGCGGCTCTTAAGAACTCCCCTAATTCAATGAGCATGTCAAGCTTGAAAGAGTGCATTGATCCAAATATGATGGATTTATATCCCATGATTGTGTTTATAAGATGGCTATGCTGGCGAAACAATGTGTGGACGACGATCCCATTTTACGGCCGGACATGA 1875 0.4405 MKLIQRSLLIPLLFFLNLRTLFSYPTPLNCSDTTRLCTSFLAFKPNQNQTLAVIQSMFDVLPNDITIEGNGRDYIFIKKNCSCASPIKKYLTNTTFTVREEQGSVYQMVREAYGGIAFMPNSTRRARVGAVVWLRLLCGCSSGLWNYFVSYVMENGDSIESLASRFGVSMDSIETVNGIANPDNVSVGAMYYIPLNSVPGEPYPVEKEISPTPVPEPSADTFTAHQVNHKAHFPYGWIIGGSGAGLILIFVTILVCISLKSSICGAQAQGSHVKDPDGKISHKFHILGRTSFCCASGRPLCCKSVDWKPTNGESSNRQINVPKAVGTDVFDMEKPVVFKCEEILSSTDYFSDSNLLGHGTYGSVYYALLRDQEVAIKRMTATKTREFMAEMKVLCKVHHASLVELIGYAASDDELFLIYEYAQKGSLGSHLHDLQNKGNTSLSWIVRVQIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDSAFRAKISDFGLAKLVGKTSEGEASTTRVVGTFGYLAPEYLSDGLATTKSDVYAFGVVLFELISGKDATTRTEGMVSKNAERRSLASIMLAALKNSPNSMSMSSLKECIDPNMMDLYPMIVFIRWLCWRNNVWTTIPFYGRT* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00223 624 SMART serkin_6 350 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00223 624 SMART LysM_2 150 194 IPR018392 -
Eupl09g00223 624 Pfam LysM domain 151 188 IPR018392 -
Eupl09g00223 624 ProSiteProfiles LysM domain profile. 149 193 IPR018392 -
Eupl09g00223 624 SUPERFAMILY Protein kinase-like (PK-like) 334 554 IPR011009 -
Eupl09g00223 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Eupl09g00223 624 Pfam Protein tyrosine and serine/threonine kinase 354 592 IPR001245 GO:0004672|GO:0006468
Eupl09g00223 624 Gene3D Phosphorylase Kinase; domain 1 323 421 - -
Eupl09g00223 624 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 43 601 IPR044812 GO:0019199|GO:0045087
Eupl09g00223 624 SUPERFAMILY LysM domain 149 194 IPR036779 -
Eupl09g00223 624 Gene3D LysM domain 145 200 IPR036779 -
Eupl09g00223 624 FunFam PTI1-like tyrosine-protein kinase 3 422 608 - -
Eupl09g00223 624 ProSiteProfiles Protein kinase domain profile. 350 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00223 624 FunFam Kinase family protein 324 421 - -
Eupl09g00223 624 ProSitePatterns Protein kinases ATP-binding region signature. 356 377 IPR017441 GO:0005524
Eupl09g00223 624 Gene3D Transferase(Phosphotransferase) domain 1 423 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00223 Eupl-Chr9 7378335 7392635 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00223 27 600 Receptor kinase-like Gene Family AT1G51940 65.979 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Eupl09g00223 PK_Tyr_Ser-Thr 7.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00223 - - nnu:104592050 994.186