Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00216 ATGGACTCTTTAGACGACGAAGATCTCCAGCAAGACGGATCTCGCCGGGAATTCGACGTGGCATCGACGGATTCCGGCGTGTCTTCCTTTTTCGGAACTGATGACAGCCGGAGCACCAATAGCTCTTGCGACATCTCCGGAAGCAGCGGCAGCTCTGGTGAGATCCCGGCCGCTGTGGTCGCAGATGCGGTGGTGCCGAAGACGGTGGGCCCTACTCTTTTGGGTAACGGTGACGGTGACGGAGGAGGAACGGACCTTAAGGTGATGGCAAGGGAGAGGTGCGTGGGGAGGAAAAATAAGGGGGTAACGTGGGGGTCCGCTTCGATCATTGGGAGACGGAGAGAGATGGAAGACGCCGTCGCAGTTATACCTGGCTTCATGTCTCACACGTGCGATCACGTGGGAGGTTGTACGGCTCCGGGTTCTAGAAGCTCCGCAGAGATCTCGCCCGTCGATTTCTTCGGCGTCTACGACGGTCACGGAGGTTCTCAGGTGGCTAAATTTTGCGCTGTACGGATCCATGAAGTGGTTGCTGAGGAGTGGGAGAGGGTAGGAAGCAGTGGAGATGGATGGCGTAGGAGGTGGGAAGCGGCATTTTCTAATGGATTTGAGCGGGCTGACAATGAGGTCGTTGAGGAGGCAGTAGCGCCTGAAATAGTTGGGTCAACCGCTGTTGTGGTGGCGGTATCAGGGTGTCAGATCATTACATCCAATTGTGGTGACTCAAGGGCAGTGCTTTGTCGAGGGACTCAAACAATCCCCTTAACAGTTGATCACAAGCCAGATAGAGAAGACGAGCTGGTGAGGATTGAAGGAGGAGGAGGGAGAGTCATAAGCTGGAATGGTGCTAGGGTGTTTGGAGTTCTTGCCATGTCCAGATCTATAGGGGACCGGTATTTGAGGCCATGGATTATTCCGGTGCCTGAAGTTACTTTTATGACAAGGAGTGAAGAAGATGAGTGTTTGATAGTGGCAAGTGATGGGCTTTGGGATGTTATGTCTAATGACGAGGTGGGTGAGGTGGCTCGCCACCTGCTGAGACGGCGGCGGCGGTCCACAGTGACTGATGAAACATCATCATCTCCAGCACAAGCCGTTGCTGACCATCTCAGTGATCTAGCTTACAGGAAGAGCAGTTCTGACAACATCTCGGTCATCGTTGTTGACCTGAAATCAAAGAGAAAGCGTCTGCATAGGCAATGA 1203 0.5362 MDSLDDEDLQQDGSRREFDVASTDSGVSSFFGTDDSRSTNSSCDISGSSGSSGEIPAAVVADAVVPKTVGPTLLGNGDGDGGGTDLKVMARERCVGRKNKGVTWGSASIIGRRREMEDAVAVIPGFMSHTCDHVGGCTAPGSRSSAEISPVDFFGVYDGHGGSQVAKFCAVRIHEVVAEEWERVGSSGDGWRRRWEAAFSNGFERADNEVVEEAVAPEIVGSTAVVVAVSGCQIITSNCGDSRAVLCRGTQTIPLTVDHKPDREDELVRIEGGGGRVISWNGARVFGVLAMSRSIGDRYLRPWIIPVPEVTFMTRSEEDECLIVASDGLWDVMSNDEVGEVARHLLRRRRRSTVTDETSSSPAQAVADHLSDLAYRKSSSDNISVIVVDLKSKRKRLHRQ* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00216 400 MobiDBLite consensus disorder prediction 21 52 - -
Eupl09g00216 400 CDD PP2Cc 105 390 IPR001932 -
Eupl09g00216 400 MobiDBLite consensus disorder prediction 1 52 - -
Eupl09g00216 400 ProSitePatterns PPM-type phosphatase domain signature. 153 161 IPR000222 GO:0043169
Eupl09g00216 400 Pfam Protein phosphatase 2C 111 383 IPR001932 -
Eupl09g00216 400 Gene3D - 90 399 IPR036457 -
Eupl09g00216 400 ProSiteProfiles PPM-type phosphatase domain profile. 103 390 IPR001932 -
Eupl09g00216 400 FunFam Protein phosphatase 2C 51 96 398 - -
Eupl09g00216 400 SMART PP2C_4 93 388 IPR001932 -
Eupl09g00216 400 PANTHER PROTEIN PHOSPHATASE 67 390 IPR015655 GO:0004722|GO:0006470
Eupl09g00216 400 SUPERFAMILY PP2C-like 94 391 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00216 Eupl-Chr9 7257939 7274318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00216 104 395 PP2C-type Phosphatase Gene Family AT4G26080 52.258 4.88e-100 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00216 K14497 - nnu:104592057 599.356