Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00214 ATGACTCGGCGGTGCTCTTATTGCAGCAACAACGGGCACAACTCGAGAACGTGTCCGTCGAGAGGAGTGAAGCTGTTCGGTGTTCGACTCATCGATGGGTCTATGAAGAAGAGTGCGAGCATGGGAAATCTCTCCTCTGCTCAATACTACTCCTCCTCCTCCTCAGCTGCAGCCTCTCCAAACGCTTGTTCTCCTTCCTCTGATCCTCTTCGAGATCGGATGCCCATTGCTGAAGGTTATGTTTCTGACGATCCTGCTCACGCTTCTTGTTCTTCTAATTGCCGCGGCGACAGAAAGAAAGGCATCCCTTGGACAGAAGAAGAGCATCGGCTGTTCTTAATGGGTCTCCAGCAGTTGGGGAAAGGGGACTGGCGTGGTATTGCACGTAATTTCGTCATGTCAAGGACTCCTACCCAGGTAGCCAGCCATGCCCAGAAGTACTTCATCCGGCAAAGCAACGCGACCCGAAGAAAGAGACGCTCCAGCCTATTTGACATGGTCACAGATATGTCCATCGATCCGTCATCATTGCCAGAAGAACCTTTCCTGCTCCCCACTTCTCAGGCAGGTGAAACTGAGAATGTAAATCCATTACCTCCATTACATCTCTCCCTTGACCGGAAATCTGAACCTATGGAAACCACTTCCAGCGAAACCCCTGCAGAAGCTGAAGAAACTGTACCATGCAGCAATTTTGCACCGATGATTCCTGCATTCTTCCCAACATATCTACCTGTTCCATTCCCATTCTGGCCACCAAATCCAACCCCAGGTGGAGAAGAGAAAGGGAGGGAAACTTCCAATCATCAGGTCCTTAAGCCGATCCCAATCCTTTCCAAGGATCCTGTCAATGTAGATGAACTAGTGGGCATGTCTAATCTCACCCTAGGAGAGGCTGTTGCTCGCCGTATTGAACCATCACAGCTCTCCAAGAAACTGATTGGAGCTCCTTCAAGGCAATCAGCATTTCATGCAAACCCACCAGTTAGTGGATCAGATTTGAGCAAGAGAAACAGTAGTGCAATCCACGCAGTTTGA 1038 0.4971 MTRRCSYCSNNGHNSRTCPSRGVKLFGVRLIDGSMKKSASMGNLSSAQYYSSSSSAAASPNACSPSSDPLRDRMPIAEGYVSDDPAHASCSSNCRGDRKKGIPWTEEEHRLFLMGLQQLGKGDWRGIARNFVMSRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMVTDMSIDPSSLPEEPFLLPTSQAGETENVNPLPPLHLSLDRKSEPMETTSSETPAEAEETVPCSNFAPMIPAFFPTYLPVPFPFWPPNPTPGGEEKGRETSNHQVLKPIPILSKDPVNVDELVGMSNLTLGEAVARRIEPSQLSKKLIGAPSRQSAFHANPPVSGSDLSKRNSSAIHAV* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00214 345 SUPERFAMILY Homeodomain-like 98 153 IPR009057 -
Eupl09g00214 345 NCBIfam myb-like DNA-binding domain, SHAQKYF class 99 151 IPR006447 GO:0003677
Eupl09g00214 345 ProSiteProfiles Myb-like domain profile. 96 148 IPR001005 -
Eupl09g00214 345 ProSiteProfiles SANT domain profile. 104 152 IPR017884 -
Eupl09g00214 345 FunFam transcription factor MYB1R1 102 153 - -
Eupl09g00214 345 CDD SANT 103 148 IPR001005 -
Eupl09g00214 345 SMART sant 100 150 IPR001005 -
Eupl09g00214 345 MobiDBLite consensus disorder prediction 323 345 - -
Eupl09g00214 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 152 IPR017930 -
Eupl09g00214 345 MobiDBLite consensus disorder prediction 189 224 - -
Eupl09g00214 345 MobiDBLite consensus disorder prediction 311 345 - -
Eupl09g00214 345 Pfam Myb-like DNA-binding domain 103 148 IPR001005 -
Eupl09g00214 345 Gene3D - 102 153 - -
Eupl09g00214 345 PANTHER TRANSCRIPTION FACTOR KUA1 3 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00214 Eupl-Chr9 7199315 7206083 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl09g00214 Myb_DNA-binding 5.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00214 - - ming:122057959 479.944