Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00206 ATGCCGGAACTGCGTAGCGGAGTGCGCAGGGGCCGGGCAGCAGCTGCACAGCCGATTCCGATTGAAGGCGATAAGGTGATACCGAAGACTAGGCGGAGGCGAACAGCAAAGAATAAGCAACCGATTGATGAAAATATTGTGAGGGGTTCTGTTCCGACGACATCCTTACAGGCTAAGGAGGAAGAACAGAGGATTTTGGAAGGAGCCGGTGGTGGGTTGGTTGGGGCAGAGCAGGAGGAGGTAGGGGAGAAACAGATGGAGGAATACGACAGCGGAGGGAGGAGCGCCGAGAAGGCTCCTGTAGCGGAAGAGGAAGGAAGCACAGCGCCGCTTCCTGAAAAGGTTCAAGTTGGTGGTTCCCCAGTGTACAGAACTGAAAGAAAACTGGGCAAAGGAGGCTTTGGGCAAGTATATGTTGGTCGTCGGATTTCAGGTGCAAATGGAAATGATAGAACTACTGGTCCAGGAGCTGTTGAGGTGGCCTTAAAATTTGAGCACAGAAGTAGTAAGGGATGCAATTATGGACCACCATATGAGTGGCAAGTATACAACACTCTCGGTGGCAGTCATGGTGTGCCACGTGTCCACTACAAGGGCCGACAAGGGGACTATTATGTAATGGTTATGGATATGTTGGGACCAAGCCTGTGGGATGTTTGGAATAACAACTCTCATACGATGTCAATTGAAATGGTTGCATGTATTGCCATCGAAGCAATCTCTATACTGGAGAAGATGCACTCCAGAGGGTATGTGCATGGGGATGTAAAGCCGGAGAACTTTTTGCTTGGTCCCCCAGGGACTCTTGAAGAGAAAAAACTGTTCCTAGTCGATCTTGGGTTAGCTACGAGGTGGCGAGATAGTTCTACTGGTCAGCATGTTGAGTATGACCAACGACCAGATGTTTTCAGAGGAACGGTGCGCTATGCTAGTGTGCATGCTCATCTGGGAAGAACTGGAAGCAGGAGAGATGACTTAGAATCTCTTGCTTACACACTCGTTTTTCTTCTACGTGGTCGTCTGCCTTGGCAAGGATACCAGGGAGAGAATAAAGGGTTCCTTGTAAGCAAAAAGAAGATGGCAACATCTCCAGAGACGCTGTGTTGCTTTTGTCCACAGCCATTCAGACAGTTTGTTGAGTATGTAGTGAACTTGAAATTCGATGAGGAGCCTAACTATGCAAAATATATTTCCCTCTTTGATGGGATTATTGGTCCAAATCCAGATGTCAGGCCAATTAACACCGATGGTGCGCAGAAGCTTATATACCACGTTGGTCATAAGAGAGGGCGGTTGACGATGGAGGAAGAGGATGATGAACAACCAAAGAAGAAGGTCCGAATGGGAATGCCTGCAACACAATGGATTAGTGTATACAATGCCCGCCGACCTATGAAGCAAAGGTATCACTATAACGTGGCAGATGGGAGGCTTGCCCAGCACATTGACAAAGGAAATGAAGATGGGCTATATATCAGCAGTGTGGCTTCTTGTTCAAATCTATGGGCCCTGATTATGGATGCAGGCACTGGTTTTAATTCTCAAGTTTATGAACTCTCACCCCATTTTCTGCATAAAGAATGGATTATGGAGCAGTGGGAGAAGAACTATTATATTAGTGCAATAGCAGGAGCTAATAATGGGAGCTCTTTAGTAGTAATGTCTAAAGGTACACAGTACGCACAGCAGTCCTACAAGGTTAGCGATTCATTTCCATTCAAGTGGATAAACAAAAAGTGGAGGGAGGGATTCTTCGTCACCTCCATGGCCACAGCTGGAAGTAGATGGGCAGTCGTTATGTCTCGTAGTGCAGGATTTTCGGACCAGGTTGTTGAACTTGATTTTCTATACCCTAGTGAAGGTATTCACCGGAGGTGGGATAATGGTTATCGCATCACAGCAACTGCAGCAACGTGGGATCAGGCTGCTCTCGTTCTTAGTGTGCCAAGAAGAAAGCCTGCTGATGAAACACAGGAGACACTTCGTACATCTGCTTTTCCAAGTACACATGTCAAGGAGAAATGGGCAAAAAATCTTTATATTGCATCTGTTTGCTATGGTCGAACAGTTTCATGA 2076 0.4692 MPELRSGVRRGRAAAAQPIPIEGDKVIPKTRRRRTAKNKQPIDENIVRGSVPTTSLQAKEEEQRILEGAGGGLVGAEQEEVGEKQMEEYDSGGRSAEKAPVAEEEGSTAPLPEKVQVGGSPVYRTERKLGKGGFGQVYVGRRISGANGNDRTTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHYKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTLEEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVSKKKMATSPETLCCFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGIIGPNPDVRPINTDGAQKLIYHVGHKRGRLTMEEEDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADGRLAQHIDKGNEDGLYISSVASCSNLWALIMDAGTGFNSQVYELSPHFLHKEWIMEQWEKNYYISAIAGANNGSSLVVMSKGTQYAQQSYKVSDSFPFKWINKKWREGFFVTSMATAGSRWAVVMSRSAGFSDQVVELDFLYPSEGIHRRWDNGYRITATAATWDQAALVLSVPRRKPADETQETLRTSAFPSTHVKEKWAKNLYIASVCYGRTVS* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00206 691 FunFam casein kinase 1-like protein HD16 96 447 - -
Eupl09g00206 691 PANTHER CASEIN KINASE-RELATED 116 656 - -
Eupl09g00206 691 MobiDBLite consensus disorder prediction 1 116 - -
Eupl09g00206 691 ProSiteProfiles Protein kinase domain profile. 123 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00206 691 Gene3D Transferase(Phosphotransferase) domain 1 89 449 - -
Eupl09g00206 691 CDD STKc_CK1 123 400 - -
Eupl09g00206 691 SUPERFAMILY Protein kinase-like (PK-like) 123 407 IPR011009 -
Eupl09g00206 691 SMART serkin_6 123 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00206 691 Pfam Protein kinase domain 123 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00206 691 MobiDBLite consensus disorder prediction 80 101 - -
Eupl09g00206 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00206 Eupl-Chr9 6943185 6949105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00206 243 400 MAP Kinase Kinase Kinase AT5G50180 26.250 1.69e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Eupl09g00206 Pkinase 1.4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00206 - - nnu:104592067 1290.02