Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00152 ATGGAAACAGAACTAGATGTCTTTCCACACCAAGAACTGAACCAGACGCCCATCAATCCTAGAAACAACCTAGACATCATCTCTTCATGGCTCGACCTAGATGAAATTTATATCCCTAGTCTCCCCCAAGAATTACATGACCTCCAAATGTTAGACGATCATCTCTTCAATTTTACAAACCCCAACTTTCACAACGACCAACTCTCCCTCATACCAGACTCCGCATTCGTCGACCTCTATGAATTTGATCCCCGACCGAGCTCCGAAAGTGCTGATAGTAACCACCCAATAGTTCCCGAATACCATATCGAACCCGAATCAGACGACTGCAATACATTCCTCAACAACAACGATTTTGGACTAATTGAACATGTGGAGAGTCAAGATTGCATCAGTGCTGATCATGTTTCTGATTCGACGACAACAACAATGTTAAATTTTAGTGAAGTGGACTCGTACCTACAGACGATCGTCGAGACCGATATAAGGGGTAGCGCGAAGGTGGGACTGCAATTTGACGATGAGGACGATGAGGAAGAAACCGACGATGATCCGAGGCCGGGTACAATGAATTCTAAGAATTTGGTATCGGAGAGGAAACGGAGGAAGAGACTTAGCCAACAATTGCTAGCTCTACGTACTCTTGTCCCGAACATCACTAAGATGGATAAACGATCGGTGTTGGTGGACGCTCTGTCTTATCTAAAAGGCATTCAAGAAGAAACTGCACGGATTCAAAAGGAGATCAACGTACAACGCCATGAACCAAGGTTGAACAACTATAGGGAGACTAGTCTGGATAATCCGGCTGGAACTCTACGCGTCCCGCGCAAGTTAGCACGCAGCACTGCTTTCAAGCCTAAAGCCCAGATTATAGAGATCGACGTAGAGAAAATAGAAGATCGAAGATATGCGGTGAAGATAACATGTAAGGGTGGTAGTAGCGTTGGAGCTGATATTCTACGAGTGTTTGAATCACTGGGTTTCGAGATTACTTATTTTGCTCTCGAACATATGAAACCACTTGTCCTAGCAACAATCTTCATAAGGATAAAGAAACATGAAAAGATTACAGAGGAAAAGCTAAGAGACTGCGTTACAAGCACATGTTTAAGATCAGGTATGAGCCTTCAGTACCCTTGA 1143 0.4392 METELDVFPHQELNQTPINPRNNLDIISSWLDLDEIYIPSLPQELHDLQMLDDHLFNFTNPNFHNDQLSLIPDSAFVDLYEFDPRPSSESADSNHPIVPEYHIEPESDDCNTFLNNNDFGLIEHVESQDCISADHVSDSTTTTMLNFSEVDSYLQTIVETDIRGSAKVGLQFDDEDDEEETDDDPRPGTMNSKNLVSERKRRKRLSQQLLALRTLVPNITKMDKRSVLVDALSYLKGIQEETARIQKEINVQRHEPRLNNYRETSLDNPAGTLRVPRKLARSTAFKPKAQIIEIDVEKIEDRRYAVKITCKGGSSVGADILRVFESLGFEITYFALEHMKPLVLATIFIRIKKHEKITEEKLRDCVTSTCLRSGMSLQYP* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00152 380 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 107 363 - -
Eupl09g00152 380 Pfam Helix-loop-helix DNA-binding domain 197 239 IPR011598 GO:0046983
Eupl09g00152 380 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 189 238 IPR011598 GO:0046983
Eupl09g00152 380 Gene3D - 187 250 IPR036638 GO:0046983
Eupl09g00152 380 MobiDBLite consensus disorder prediction 168 201 - -
Eupl09g00152 380 SMART finulus 195 244 IPR011598 GO:0046983
Eupl09g00152 380 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 193 262 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00152 Eupl-Chr9 5759104 5762969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00152 192 349 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 33.750 1.26e-23 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl09g00152 HLH 5.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00152 - K26214 nnu:104592121 315.849