Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00140 ATGGGGTGCTGGTACTCGAAGGATTGCATCGGGCAGGTCCCTAGTTCTCCTGGGGTTTCTCAGGTTAAAGATAGTGAAAATGCCAGAGTCACTCTTGGCTCTGTTTTTTCTCCTGTTTCTTCAAATGAGCAAGGAGAAAATGGAGATCAATTGAATCAGTTAAGTATAACCAGGGATTCTGAAGCGGTTATAAATAGGTTGTCGAGGGTGTCTTCACAGTTTCTTCCTCCTGATGGGTCCCGTACGGTTAAAGTTCCGTCAGGAAACTATGAATTGAGATACTCATATCTGTCACAAAGAGGGTACTATCCAGAAGCTCTTGACAAAGCAAACCAGGACAGTTTCTGCATTCACACCCCATTTGGGACGAATCCTGATGATCACTTCTTTGGGGTTTTTGATGGGCATGGAGAATTTGGGGCTCAGTGCTCTCAGTTTGTGAAGCGGAAATTATGTGAAAATTTGCTTAGAAATAGTCAGTTTCATATGGATGCAGTTGAGGCATGTCATGCTGCTTTCTTAACCACAAATTCACAGTTGCACGCTGATAGCTTGGATGACAGCATGAGTGGGACCACGGCGATTACGATATTGGTTCGGGGGAGGACAATATATGTTGCGAATTCAGGTGACTCTAGGGCTATTATTGCTGAGAGGAGAGGGAAGGATGTTGTGGCTGTGGACCTCTCTATCGATCAGACTCCTTTTCGAGTTGATGAGCTTGAAAGGGTTAAGCTTTGTGGAGCTAGAGTTCTCACATTGGATCAGATCGAAGGGCTGAAGAACCCAGATGTGCAGTGTTGGGGCACTGAAGAAGGCGATGACGGTGATCCTCCAAGATTGTGGGTGCAAAATGGGATGTATCCTGGTACGGCTTTTTCAAGAAGTATAGGGGATTCCATTGCTGAGACTATTGGTGTTGTTGCTACCCCAGAGATTGTTGTTTTGGAGCTCACACCGCATCATCCATTCTTTGTGATTGCCAGTGATGGAGTGTTTGAGTTCCTTTCTAGCCAAACAGTGGTTGACATGGTTGCGAAGTTCAAAGATCCTCGTGATGCTTGTGCCGCAATTGTTGCTGAATCTTATCGACTTTGGCTGCAGTATGAAACTCGTACTGATGACATTACAGTCATGGTTGTGCATATAAATGGGCTAACTGATACAGGAGTAGTTCAATCAACAACCCCAGATTTTGTTGCAAAGCCTCTACCTCAAGTTGTAGAGATGACAGGTTCTGAATCGCCTTCAACCATAAGCTGGAATTCTAGGAACCATCGTGCAAGGCATGATTTGTCACGGACACGTCTCCGGGCTATTGAATGTTCCCTAGAGAATGGGCAAGCTTGGGCTCCTCCATCTTCGTTGCATAGGAAGACCTGGGAAGAAGAAGCACATATTGAGAGGGCTTTGCAAGACCATTTCCTTTTCAGAAAACTTACAGATTCTCAATGCCATGTTTTGTTGGATTGCATGCAAAGAGTTGAGGTCCAGCCTGGAGATGTTGTTGTGCAACAGGGTGGAGAGGGAGATTGCTTTTATGTTGTTGGCAGTGGGGAGTTTGAGGTCTTGGCTACCCAGGACGAGAAAAGTGAAGAGGTACCTAGGGTTCTGCAACGATACACAGCTGAAAAATTGTCATCCTTCGGAGAGCTGGCACTGATGTACAACAAACCACTCCAGGCCTCCGTTCGTGCTGTGACAAATGGAACACTCTGGGCTTTGAAGAGAGAAGATTTCCGTGGAATCCTAATGTCAGAATTTTCAAACTTATCATCATTGAAGTTGCTCCGATCAGTAGACCTTCTCTCAAGGTTGACAATCTTACAGCTGAGTCACATTGCAGATTCTCTGTCTGAAGTTTCCTTCTCAGATGGGCAGACAATAATTAATACGAATGAGTGTCTTTCTGCACTTTATATTATCCAGAAGGGTCAAGTGAGAATCACTTATGACATGGATGTTATAAGAAGTCTGAATGTCAGTAGCCTGTTATCTGATAATCCTGAACAAGATCATACTCCTAGCAATAAGGAACTCTCAGTGGAGAAGACAGAGGGAAGCTATTTCGGTGAATGGGCACTTCTTGGTGAACATATTGGCTCCTTAAGTGCAGTTGCTGTGGGTGATGTGGTATGTGTTGTTGTAACAAAGGAGAAGTTTGATTCTGCTGTTGGACCTTTGGCAAAGCTTTCGCAGGATGATCGCAAGCTGAAAGATTATTCTCTGAGTTCTAAGGAACCTGCTAAGAACATAGATGCTTCCAATTTGGGTAAAGTTCAACTCTCTGATTTGGAGTGGAGAATGTGTATATATTCCACAGACTGCAGTGAGATTGGTCTTGTACTTTTAAGAGGCTCAGACAATATGCTGAGCTTGAAAAGGTTCTCAAAGCAGAGGATTAAACGACTTGGGAAGGAAGCACAGGTCTTGAAAGAGAAAGATCTGATGAAGAGTTTGAGCGCATCAGCTTGCATGCCACAAGTTCTACGCACTTGTGCCAATCAAACACATGTCGGCATATTGCTAAATACATGCCTGGCTTGCCCATTGGCTTCAATACTTCACACTCCACTAGATGAACCATCTGCAAGGTTCTGTGCTGCTTCTGTCCTCCTTGCTTTAGAAGAGCTACACAAGAATGGTGTTCTCTACAGAGGTGTTTCTCCGGATGTTCTAATGTTTGACCAAACAGGCCATCTACAGCTAGTGGACTTCAGATTTGGGAAGAAGTTATCTAATGAGAGAACATTCACAATATGTGGGATGGCAGACTCTTTAGCTCCAGAGATAGTCCAGGGGAAAGGCCATGGTCTCGCTGTTGACTGGTGGGCATTGGGAGTCTTGATTTATTTCATGCTACAAGCTGAAATGCCGTTTGGGTCATGGAGAGAGAGTGAGCTCGATACGTTTGCGAAGATTGCAAAAGGGCACTTAACCCTTCCACAGACCTTCAGCCCTGAAGCTGTTGATCTCATCACCAAGTTACTTGAAGTTGAGGAAAACACAAGACTAGGAAGCCAGGGTCCCGATTCTGTCAAAAGTCATGAGTGGTTTGATGGTGTTGACTGGAAAGGAATCACAGACTGTAGCTTCCCTGTTCCTCGTGAGATTACATCTCGTATCACTCTGTATTTGGAACATCACAAAGAGGAATGTTCCATTCCGCTATTTTCCCCGTCTCGAGACATAGAAGAACTTAACACTCCAGAATGGTTTGAAGACTGGTAA 3231 0.4457 MGCWYSKDCIGQVPSSPGVSQVKDSENARVTLGSVFSPVSSNEQGENGDQLNQLSITRDSEAVINRLSRVSSQFLPPDGSRTVKVPSGNYELRYSYLSQRGYYPEALDKANQDSFCIHTPFGTNPDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNSQFHMDAVEACHAAFLTTNSQLHADSLDDSMSGTTAITILVRGRTIYVANSGDSRAIIAERRGKDVVAVDLSIDQTPFRVDELERVKLCGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVQNGMYPGTAFSRSIGDSIAETIGVVATPEIVVLELTPHHPFFVIASDGVFEFLSSQTVVDMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITVMVVHINGLTDTGVVQSTTPDFVAKPLPQVVEMTGSESPSTISWNSRNHRARHDLSRTRLRAIECSLENGQAWAPPSSLHRKTWEEEAHIERALQDHFLFRKLTDSQCHVLLDCMQRVEVQPGDVVVQQGGEGDCFYVVGSGEFEVLATQDEKSEEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGTLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSHIADSLSEVSFSDGQTIINTNECLSALYIIQKGQVRITYDMDVIRSLNVSSLLSDNPEQDHTPSNKELSVEKTEGSYFGEWALLGEHIGSLSAVAVGDVVCVVVTKEKFDSAVGPLAKLSQDDRKLKDYSLSSKEPAKNIDASNLGKVQLSDLEWRMCIYSTDCSEIGLVLLRGSDNMLSLKRFSKQRIKRLGKEAQVLKEKDLMKSLSASACMPQVLRTCANQTHVGILLNTCLACPLASILHTPLDEPSARFCAASVLLALEELHKNGVLYRGVSPDVLMFDQTGHLQLVDFRFGKKLSNERTFTICGMADSLAPEIVQGKGHGLAVDWWALGVLIYFMLQAEMPFGSWRESELDTFAKIAKGHLTLPQTFSPEAVDLITKLLEVEENTRLGSQGPDSVKSHEWFDGVDWKGITDCSFPVPREITSRITLYLEHHKEECSIPLFSPSRDIEELNTPEWFEDW* 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00140 1076 ProSiteProfiles Protein kinase domain profile. 746 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00140 1076 Pfam Protein phosphatase 2C 120 362 IPR001932 -
Eupl09g00140 1076 Gene3D Transferase(Phosphotransferase) domain 1 850 1032 - -
Eupl09g00140 1076 Pfam Cyclic nucleotide-binding domain 621 724 IPR000595 -
Eupl09g00140 1076 Pfam Cyclic nucleotide-binding domain 495 586 IPR000595 -
Eupl09g00140 1076 CDD CAP_ED 476 585 IPR000595 -
Eupl09g00140 1076 ProSiteProfiles cAMP/cGMP binding motif profile. 602 727 IPR000595 -
Eupl09g00140 1076 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 463 1036 - -
Eupl09g00140 1076 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 450 590 - -
Eupl09g00140 1076 ProSiteProfiles PPM-type phosphatase domain profile. 93 383 IPR001932 -
Eupl09g00140 1076 Gene3D Phosphorylase Kinase; domain 1 769 849 - -
Eupl09g00140 1076 SMART PP2C_4 85 381 IPR001932 -
Eupl09g00140 1076 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 88 385 - -
Eupl09g00140 1076 SUPERFAMILY cAMP-binding domain-like 457 586 IPR018490 -
Eupl09g00140 1076 ProSiteProfiles cAMP/cGMP binding motif profile. 476 585 IPR000595 -
Eupl09g00140 1076 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Eupl09g00140 1076 Gene3D - 84 384 IPR036457 -
Eupl09g00140 1076 CDD CAP_ED 602 705 IPR000595 -
Eupl09g00140 1076 SMART cnmp_10 476 600 IPR000595 -
Eupl09g00140 1076 SMART cnmp_10 602 740 IPR000595 -
Eupl09g00140 1076 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 592 741 - -
Eupl09g00140 1076 SUPERFAMILY Protein kinase-like (PK-like) 764 1050 IPR011009 -
Eupl09g00140 1076 SUPERFAMILY cAMP-binding domain-like 594 726 IPR018490 -
Eupl09g00140 1076 Gene3D Jelly Rolls 591 742 IPR014710 -
Eupl09g00140 1076 CDD PP2Cc 109 383 IPR001932 -
Eupl09g00140 1076 SUPERFAMILY PP2C-like 80 385 IPR036457 -
Eupl09g00140 1076 SMART serkin_6 773 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00140 1076 Pfam Protein kinase domain 784 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00140 1076 PRINTS cAMP-dependent protein kinase signature 512 526 - -
Eupl09g00140 1076 PRINTS cAMP-dependent protein kinase signature 497 511 - -
Eupl09g00140 1076 PRINTS cAMP-dependent protein kinase signature 547 556 - -
Eupl09g00140 1076 PRINTS cAMP-dependent protein kinase signature 721 733 - -
Eupl09g00140 1076 Gene3D Jelly Rolls 448 590 IPR014710 -
Eupl09g00140 1076 Coils Coil 794 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00140 Eupl-Chr9 5497719 5516635 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00140 1 1076 PP2C-type Phosphatase Gene Family AT2G20050 69.035 0.0 1513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Eupl09g00140 Pkinase 7.7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00140 - - nnu:104592113 1774.99