LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl09g00139	ATGGTGAGGATACTTCCCATGGCGTCCTCATCCCTTCATCTCGCCTCCCTTCGTCCTTCTCTCTCTTCTTTCAGATTCTCAGCCACAACCGCTCGCTTAGATGTTTCTCTGACGGCCCACAACCCTTCGCGAAGGCTCGCGCTCTTTCATCTCGGCAGCGCTATTCCACAGGCGCAGTTGTTTGGTATAAAAACATCTAAGTTGTTAAGAACAGAGGGAAACAACATAGAGTCAAGCACAGCTGGAAATATGGCGCAAGCAAGCACTGCTGTTAGCCAGGAAAGTGCCTTAGAGTGGGTCAAAAGGGACAAGCGAAGAATGTTACATGTTGTTTATCGTGTTGGAGACTTGGACAAGACCATAAAATTCTATACGGAGTGCCTGGGGATGAAGCTGTTGCGGAAACGTGATATCCCAGAGGAGAGATACACAAATGCCTTTCTTGGATATGGCCCTGAAGATTCACACTTTGTTGTTGAACTCACTTACAATTACGGGGTTGACAAGTATGACATTGGATCTGGTTTTGGCCACTTTGGTATTGCGGTCGATGATGTTGTCAAGACAGTGGATCTCATAAAGGCCAAGGGGGGCAAAGTAACCAGGGAACCTGGTCCTGTCAAAGGTGGCAGTACAGTAATTGCTTTTATTGAAGATCCTGATGGTTATAAGTTTGAGCTTTTGGAAAGGGGGCCTACACCTGAGCCCCTATGCCAAGTAATGCTTCGTGTGGGTGATCTTGATCGCTCTATAAATTTCTATGAGAAGGCTTTTGGCATGGAGCTACTTCGCAAACGAGATAATCCCGAGTACAAGTATACAATAGCCTTGATGGGCTATGGTCCTGAAGATAAAAACACGGTGCTGGAGTTGACATACAACTATGGGGTCACAGAATACGACAAAGGAAATGGTTATGCACAGATTGCAATAGGCACAGATGATGTTTATAAGACTGCAGAAGCAATTAAACTTTTTGGTGGGAAGATTACCCTTGAACCTGGGCCCTTGCCAGGCATCAATACCAAGATTACTGCTTGCTTAGATCCTGATGGTTGGAAATCGGTACAGCTTCTAAGCATATTACTTCTTAATGCTTATACCTTGAAAAACTTTTTTCTCTTCTGA	1128	0.4495	MVRILPMASSSLHLASLRPSLSSFRFSATTARLDVSLTAHNPSRRLALFHLGSAIPQAQLFGIKTSKLLRTEGNNIESSTAGNMAQASTAVSQESALEWVKRDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGSGFGHFGIAVDDVVKTVDLIKAKGGKVTREPGPVKGGSTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEKAFGMELLRKRDNPEYKYTIALMGYGPEDKNTVLELTYNYGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLFGGKITLEPGPLPGINTKITACLDPDGWKSVQLLSILLLNAYTLKNFFLF*	376

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl09g00139	375	CDD	GlxI_Ni	107	228	-	-
	Eupl09g00139	375	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain profile.	236	360	IPR037523	-
	Eupl09g00139	375	FunFam	Lactoylglutathione lyase	103	232	-	-
	Eupl09g00139	375	Pfam	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	239	353	IPR004360	-
	Eupl09g00139	375	Pfam	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	107	227	IPR004360	-
	Eupl09g00139	375	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	237	353	IPR029068	-
	Eupl09g00139	375	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain profile.	106	230	IPR037523	-
	Eupl09g00139	375	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	105	235	IPR029068	-
	Eupl09g00139	375	Gene3D	-	233	360	IPR029068	-
	Eupl09g00139	375	ProSitePatterns	Glyoxalase I signature 1.	239	260	IPR018146	GO:0004462\|GO:0046872
	Eupl09g00139	375	NCBIfam	lactoylglutathione lyase	106	231	IPR004361	GO:0004462\|GO:0046872
	Eupl09g00139	375	ProSitePatterns	Glyoxalase I signature 1.	109	130	IPR018146	GO:0004462\|GO:0046872
	Eupl09g00139	375	CDD	GlxI_Ni	237	354	-	-
	Eupl09g00139	375	PANTHER	LACTOYLGLUTATHIONE LYASE	85	357	-	-
	Eupl09g00139	375	FunFam	Lactoylglutathione lyase	233	366	-	-
	Eupl09g00139	375	Gene3D	-	79	231	IPR029068	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl09g00139	Eupl-Chr9	5455716	5472757	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl09g00139	239	353	Calmodulin-binding Proteins	AT1G08110	27.857	3.09e-10	58.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl09g00139	K01759		-	nnu:104595134	638.262