Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00137 ATGGAAACAGAACTAGATGTTTTTCCACACCAAGAACTGAACCAGACGCCCATCAATCCTAGAAACAACCTAGACATCATCTCTTCATGGCTCGACCTAGATGAAATTTATATCCCTACTCTCCCCCAAGAATTACATGACCTCCAAATGTTAGACGATCATCTCTTCAATTTTACAAACCCCGACTTTCACAACGACCAACTCTCCCTCATACCAGACTCCGCATTCGTCGACCTCTATGAATTTGATCCCCGACCGAGCTCCGAAAGTGCTGATAGTAACCACCCAATAGTTCCCGAATACCATATCGAACCCGAATCAGACGACTGCAATACATTCCTCAACAACAACGATTTTGGACTAATTGAACATGTGGAGAGTCAAGATTGCATCAGTGCTGATCATGTTTCTGATTCGACGACAACAACGATGTTAAATTTTAGTGAAGTGGACTCGTACCTACAGACGATCGTCGAGACCGATACAAGGGGTAGCGCGAAGGTGGGACTGCAATTTGACGATGAGGACGATGAGGAAGAAACCGACGATGATCCGAAGCCGGGTACAATGAATTCTAAGAATTTGGTATCGGAGAGAAAACGGAGGAAGAGACTTAGCCAACAATTGCTAGCTCTACGTACTCTTGTCCCGAACATCACTAAGATGGATAAACGATCGGTGTTGGTGGACGCTCTGTCTTATCTAAAAGGCATTCAAGAAGAAACTGCACGGATTCAAAAGGAGATCAACGTACAACGCCATGAACCAAGGTTGAACAACTATAGGGAGACTAGTCTGGATAATCCGGCTGGAACTCTACGCGTCCCGCGCAAGTTAGCACGCAGCACTGCTTTCAAGCCTAAAGCCCAGATTATAGAGATCGACGTAGAGAAAATAGAAGATCGAAGATATGCGGTGAAGATAACATGTAAGGGTGGTAGTAGCGTTGGAGCTGATATTCTACGAGTGTTTGAATCACTGGGTTTCGAGATTACTTATTTTGCTCTCGAACATATGAAACCACTTGTCCTAGCAACAATCTTCATAAGGATAAAGAAACATGAAAAGATTACAGAGGAAAAGCTAAGAGACTGCGTTACAAGCACATGTTTAAGATCAGGTATGAGCCTTCAGTACCCTTGA 1143 0.4392 METELDVFPHQELNQTPINPRNNLDIISSWLDLDEIYIPTLPQELHDLQMLDDHLFNFTNPDFHNDQLSLIPDSAFVDLYEFDPRPSSESADSNHPIVPEYHIEPESDDCNTFLNNNDFGLIEHVESQDCISADHVSDSTTTTMLNFSEVDSYLQTIVETDTRGSAKVGLQFDDEDDEEETDDDPKPGTMNSKNLVSERKRRKRLSQQLLALRTLVPNITKMDKRSVLVDALSYLKGIQEETARIQKEINVQRHEPRLNNYRETSLDNPAGTLRVPRKLARSTAFKPKAQIIEIDVEKIEDRRYAVKITCKGGSSVGADILRVFESLGFEITYFALEHMKPLVLATIFIRIKKHEKITEEKLRDCVTSTCLRSGMSLQYP* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00137 380 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 189 238 IPR011598 GO:0046983
Eupl09g00137 380 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 107 363 - -
Eupl09g00137 380 Gene3D - 186 250 IPR036638 GO:0046983
Eupl09g00137 380 MobiDBLite consensus disorder prediction 165 201 - -
Eupl09g00137 380 SMART finulus 195 244 IPR011598 GO:0046983
Eupl09g00137 380 Pfam Helix-loop-helix DNA-binding domain 197 239 IPR011598 GO:0046983
Eupl09g00137 380 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 193 262 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00137 Eupl-Chr9 5437526 5441393 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00137 184 349 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 32.738 1.24e-23 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl09g00137 HLH 5.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00137 - K26214 nnu:104592121 321.242