Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00136 ATGGAGAGGATCGTCGGAGAGAAGTATAAGTTAGGGCGGAAGATCGGAAGTGGATCCTTCGGAGAAATCTATCTAGCGACTCATATTGATACGTTTGAGATCGTTGCAGTGAAGATTGAGAACAGCAACACAAAACATCCACAACTGCTATACGAAGCCAAGTTATACAATATTCTTCAGGGAGGAAGTGGTATTGCTGGCATATACTGGTGTGGGGTAGATGGGGAGGACAATGTCCTTGTCCTTGACTTGCTGGGACCAAGTCTTGAAGATTTATTTGTTTACTGTGGAAGGAAGTTTTCTCTGAAAACAGTTTTAATGTTGGCCGATCAGATGATTACAAGAATAGAGTATCTGCACTCTAAAGGATTTTTGCATAGAGACATCAAGCCAGATAACTTCCTCATGGGTCTTGGTCGGAAAGCAAACCAGGTCTACATAATTGATTTCGGACTTGCAAAAAGATATCGTGACTCTATGACCAATCGTCATATTCCTTACAGGGAGAACAAAAACTTAACGGGGACTGCACGCTATGCAAGTTGCAATACTCATCTAGGCATTGAGCAAAGCCGGCGGGATGATTTGGAGTCTCTTGGTTACGTTCTTTTGTACTTTTTGAGAGGAAGTTCTGCATGTAGCCTTCCATGGCAGGGTTTAAAAGCCGCGACAAAGAAGCAAAAGTATGACAAGATATGTGAGAAGAAAGTATCAACTCCTATTGAAGTTTTGTGCAAGTCTCATCCGGTAGAGTTTGCATCATACTTCCATTATTGCCACTCTTTGACATTTGATCAACGACCTGACTATGGATTCTTGAAGCGCCTTTTCCGTGATTTGTTTACTCGTGAAGCATACAAATTTGATTTTATTTTTGACTGGACCATCATAAAGTACCAGCAAGCACAAAAGTCAAAAGCTCAGCATCGGTTATCTCCAGTTTCTGGAGGGAACAGCACTCGAGCAATACCGATGGATGTTGACAAATATCAAAGAGGAAATGATGCTTCTTATTCAGCTGAGGCAGCAGAGCGTGTAGGATCCAGTAATGCTGCACGTCCTTGCATCCACATGCAATTTAAATCAGCAACCGACAGAACTTCGGGTGCTGACAATCCTGTTGAGAAAGCTACTGTCAACAGTTTTGCTGAGAAAGTGCACATGCCATCTACGTCATTTGCTTTGGCTGGTACCTCCAAGAGAAATGCTACGAAACCCTTGGTGCCCACTGAATCTGGAAACCTCGGTCATGGAAATGACAGCAAAATTGGTCCTTCAAGCAGTTGGATTCTTTCATTACAACGAAATTCTTCTGCTAAGTAA 1323 0.4248 MERIVGEKYKLGRKIGSGSFGEIYLATHIDTFEIVAVKIENSNTKHPQLLYEAKLYNILQGGSGIAGIYWCGVDGEDNVLVLDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYLHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSMTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSSACSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFTREAYKFDFIFDWTIIKYQQAQKSKAQHRLSPVSGGNSTRAIPMDVDKYQRGNDASYSAEAAERVGSSNAARPCIHMQFKSATDRTSGADNPVEKATVNSFAEKVHMPSTSFALAGTSKRNATKPLVPTESGNLGHGNDSKIGPSSSWILSLQRNSSAK* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00136 440 Pfam Protein kinase domain 9 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00136 440 ProSiteProfiles Protein kinase domain profile. 9 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00136 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Eupl09g00136 440 FunFam Casein kinase I isoform delta-like 1 344 - -
Eupl09g00136 440 MobiDBLite consensus disorder prediction 395 440 - -
Eupl09g00136 440 SUPERFAMILY Protein kinase-like (PK-like) 5 294 IPR011009 -
Eupl09g00136 440 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Eupl09g00136 440 Gene3D Transferase(Phosphotransferase) domain 1 1 337 - -
Eupl09g00136 440 PANTHER CASEIN KINASE-RELATED 7 339 - -
Eupl09g00136 440 SMART serkin_6 9 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00136 Eupl-Chr9 5401317 5411044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00136 5 209 EF-hand Containing Proteins AT4G23650 28.910 3.33e-12 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Eupl09g00136 Pkinase 2.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00136 K08960 - ming:122066864 761.911