Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00122 ATGAATCGAGGTGTTTTGCAGAGCTCACCGGTGCAACAATTAATGGCCGGAAACCCTAATTGGTGGAACATTAATAACATGCGCCAACCATCTCCGCAACCCTCTCCTCTCTTGCCTTCTTCTGCCTCACTCTTCCCACAATTCACACCTCCAGCTTCCTCACTTCCTTTAACCTCTTGGTACGATAACCAAGACCTTCCAGAGTCGTGGAGCCAACTTCTTCTGGGTGGATTGGTGGGTGAAGAAGATAGGTCTGGTCTGAATCAGTTTCAAGCTAAGAAGTTGGAGAATTGGGAGGACCAAGTGCTGTATTCGTCGTCAAGTGTTCCTGTTGTTGATGTAAAACAAGAAGTCTCCGAAAGTGGTTACGTGTATGGTCATGGAAACGAAGAATTTCAGGCAGCGAGGCCTACTTGGTCTCCAATTGTACCAGCTTCGTCTCCGAGGTCGTGTGTTACTAGTTTCAGTAGTAATATGTTGGATTTCTCTAACAGCAAGGCAGATGGGAGGCATCATCAACCAGATCATTCATCTGAGTGTAACAGCACAGTAACTGGAGGAGCATTTAAGAAAGCCAGGATTCAGCCCACTTCAACCCAATCTACCTTCAAAGTGAGGAAGGAGAAACTTGGGGACAGAATTACAGCCCTTCACCAGCTAGTTTCTCCATTTGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCTATTGGCTACATTAGATTCCTTCAGAGTCAAATTGAGGCCCTGAGCTCCCCGTACTTGGGTAATGGATCTGGAAACATGAGGAACCAACAGTCTGTTCAAGGGGAAAGGAATTGCATATTTCCTGAAGACCCTGGTCAGCTGTTGAATGATACCTGCATGAATAGAAAAGGAGCTCCTGATCAGGATCCTGAAGATGAACCAAAGAAGGACTTGAGGAGTAGAGGGTTGTGCCTTGTTCCTTTGTCTTGCACTCTGCAAGTTGGGAGTGACAATGGAGCGGATTATTGGGCTCCAGCTCTTAGTGGGGGATTTCGATAG 1026 0.4649 MNRGVLQSSPVQQLMAGNPNWWNINNMRQPSPQPSPLLPSSASLFPQFTPPASSLPLTSWYDNQDLPESWSQLLLGGLVGEEDRSGLNQFQAKKLENWEDQVLYSSSSVPVVDVKQEVSESGYVYGHGNEEFQAARPTWSPIVPASSPRSCVTSFSSNMLDFSNSKADGRHHQPDHSSECNSTVTGGAFKKARIQPTSTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSSPYLGNGSGNMRNQQSVQGERNCIFPEDPGQLLNDTCMNRKGAPDQDPEDEPKKDLRSRGLCLVPLSCTLQVGSDNGADYWAPALSGGFR* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00122 341 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 70 323 - -
Eupl09g00122 341 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 194 243 IPR011598 GO:0046983
Eupl09g00122 341 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 204 255 IPR036638 GO:0046983
Eupl09g00122 341 MobiDBLite consensus disorder prediction 287 307 - -
Eupl09g00122 341 FunFam transcription factor bHLH68 isoform X1 201 254 - -
Eupl09g00122 341 CDD bHLH_AtbHLH_like 202 251 IPR045239 -
Eupl09g00122 341 Gene3D - 200 257 IPR036638 GO:0046983
Eupl09g00122 341 MobiDBLite consensus disorder prediction 293 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00122 Eupl-Chr9 5034408 5037832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00122 1 283 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 46.648 2.46e-73 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00122 - - nnu:104592137 577.4