Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00103 ATGGAGCAAAGTGACGGCGGGGATTTCCCGCCCCAAAAGCTCCAATCGGCTACGATGACAACAGGGACGGTAACGGAGACGTCTGATTTCCATCCTAAGAAGCTCGCGAGGCAGCTGGATTTCACGGCGTTCTGCAGTGCATCGACGGCTGTTGTCTTGCCGGAACACCCGCAACAGCAGCATCCTCAGCCGCCACCCCCACCACCAGCGCCACCGCTTTCTCGTCCTTCGTTGTCCATTGTAAAGCCAGAGTCCCCAAGATCACGATCACGACCTAACATTGAAGTAAAAGATGGTACTCCGAAGAAACAAAAGCAATGCAATTGTAAACACTCGCGATGCTTGAAGTTGTATTGTGAGTGCTTTGCTTCGGGAATTTACTGTGATGGGTGTAACTGTGCAAATTGTTATAATAATGTTGAGAATGAGGCTGCTAGGCAAGAAGCTGTTGAGGCTACTTTAGAGCGTAATCCAAATGCGTTCCGACCAAAGATTGCTAGCAGTCCACATGGAACTCGGGATATTAGGAACACAAGTCAAGCGAACTCATACAATCAACCAACAAAGCCTTATCCCAACTGTTGGGGACAAAAGGAAGAGGCAGGGGAGGTTCCAATGGTGGGAAAGCACAACAAAGGGTGTCACTGCAAGAAATCAGGGTGCCTCAAGAAGTATTGCGAGTGCTTTCAAGCTAACATACTCTGCTCTGAAAATTGTAAATGCATGGACTGCAAGAACTTTGAAGGAAGTGAAGAGAGACGAGCACTCTTCCATGGTGACCATGGTAATGCTCTCTACATGCAGCAGGCAGCAGCCAATGCTGCCATCACTGGGGCTATTGGATCCTCTGGCTATGGTTCCCCTCCAGCATCCAAGAAGAGAAAAAATCAGGAAATCTTCTTCGGGACAACAGCCAAGGATCCGGCCATTCACAGGCTTTCTCAATTCCCACAGGTGAATCATCTAAAAGCTTCCGCCTCCTCTTCTTCCTTGTCGTCCTTACCTCTTCCTCGTGTTGTTAACCCTGCAGTATTTGGCTCTTCAAAGTTCACATACAGGTCTTTGTTAGCAGACATTATCCAGCCACAGGATGTGAAGGAGCTTTGCTCACTTTTGGTGGCAGTATCAGGAGAAGCTGCCAAGACACTTGCAGAGAAGAAAGACACAACAGAGAAGCCAGTGGAGAGAGAAGATCAGATGGAAAGCTCCCTTGCTACGTCGACTCAAGACAGGGAGGATAGCAAGAAAGAACCCGATGTTCAGAAATCTGTCATTGATGATCGTTCGAGCGGGAACCAAGCTGATAAAATAGGCACCGATGATTCCGGATCGGATGGTACTGATGTGCAGAAAGGAAGGCCAATGTCTCCTGGAACACTAGCACTGATGTGCGATGAGCAAGATACAATGTTCATGGCAGCTGCATCCCCAAATGGGGCTCTGGGCCATGGCCACAACACACCTCTCCGGTTGCCACATGGGCAGGGGATGACAGAGGTCTATGCGGAACAGGAAAGGCTTGTCTTGACGGGGTTCCGGGATTGTCTTCGAAAGATCATTACTTGTGGAAGAATAAAAGAAGAAAAATATTCTTCGTTGGGTGCGAGAATGGAAACACAGAGTCAAGTGGAACCTGTTGGCAATGGCATTGTGAGACCTATTCCAGCTACTGGTGTGATATCTCAGACGGTGAGTGCTGTCACTGTTGCTTCTAATAATGGTCTACCTCTGAAGGTTGGCCACCCCAATGAAAATGGGGATATGATAAAACCAAAGATTGAAAATGAGATGTAA 1794 0.4816 MEQSDGGDFPPQKLQSATMTTGTVTETSDFHPKKLARQLDFTAFCSASTAVVLPEHPQQQHPQPPPPPPAPPLSRPSLSIVKPESPRSRSRPNIEVKDGTPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCANCYNNVENEAARQEAVEATLERNPNAFRPKIASSPHGTRDIRNTSQANSYNQPTKPYPNCWGQKEEAGEVPMVGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERRALFHGDHGNALYMQQAAANAAITGAIGSSGYGSPPASKKRKNQEIFFGTTAKDPAIHRLSQFPQVNHLKASASSSSLSSLPLPRVVNPAVFGSSKFTYRSLLADIIQPQDVKELCSLLVAVSGEAAKTLAEKKDTTEKPVEREDQMESSLATSTQDREDSKKEPDVQKSVIDDRSSGNQADKIGTDDSGSDGTDVQKGRPMSPGTLALMCDEQDTMFMAAASPNGALGHGHNTPLRLPHGQGMTEVYAEQERLVLTGFRDCLRKIITCGRIKEEKYSSLGARMETQSQVEPVGNGIVRPIPATGVISQTVSAVTVASNNGLPLKVGHPNENGDMIKPKIENEM* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00103 597 Coils Coil 137 157 - -
Eupl09g00103 597 MobiDBLite consensus disorder prediction 9 28 - -
Eupl09g00103 597 MobiDBLite consensus disorder prediction 383 399 - -
Eupl09g00103 597 MobiDBLite consensus disorder prediction 161 184 - -
Eupl09g00103 597 MobiDBLite consensus disorder prediction 425 445 - -
Eupl09g00103 597 PANTHER TESMIN/TSO1-RELATED 48 526 IPR028307 -
Eupl09g00103 597 MobiDBLite consensus disorder prediction 408 424 - -
Eupl09g00103 597 MobiDBLite consensus disorder prediction 383 460 - -
Eupl09g00103 597 MobiDBLite consensus disorder prediction 58 76 - -
Eupl09g00103 597 MobiDBLite consensus disorder prediction 52 106 - -
Eupl09g00103 597 MobiDBLite consensus disorder prediction 88 105 - -
Eupl09g00103 597 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 212 246 IPR005172 -
Eupl09g00103 597 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 104 139 IPR005172 -
Eupl09g00103 597 SMART CXC_2 102 142 IPR033467 -
Eupl09g00103 597 SMART CXC_2 209 250 IPR033467 -
Eupl09g00103 597 ProSiteProfiles CRC domain profile. 103 249 IPR005172 -
Eupl09g00103 597 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00103 Eupl-Chr9 4475029 4502995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00103 2 563 CPP Transcription Factor Family AT4G29000 51.741 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Eupl09g00103 TCR 3.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00103 - - ming:122075306 778.089