Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00095 ATGCCCCTTAAAACAACCCTTTCATCATCCAAGACTCTAACTGTCATGGGCGTGGAGATGTCGAACCCACCCACTTCTCGCACCAAAGACTTTTTTGCTTCTCCAGCTCTCTCTCTTACTCTTGCCGGTGTTTTCCGCGATGCGGGTGCGGCGGCAGCGTCGAGTATGGAGGTGGAGGAAGGAGATGAAGAGAGTGGAGGAGGTGGTGGACAAGAAGGTACAGTGGAGATTAGCAGTGAGAACACAGGGCCTGGCAGATCCGACGACGATGCCGACGCCGATGGAGTGCAAGAGGAGGATGGTGAAGAGGATAAGAGTAAGAAGAAGAAGAGAAAAAAGTATCATAGACATACAGCTGAGCAGATCAGAGAAATGGAAGCGCTGTTCAAAGAGTCACCCCATCCAGATGAGAAGCAAAGGCAACAACTGAGCAAGAAATTAGGCCTTGCACCTAGGCAAGTCAAGTTCTGGTTCCAAAATCGTCGAACCCAAATCAAGGCCATACAGGAGCGCCATGAGAACTCTCTGTTGAAATCAGAGATGGATAAACTCCGAGACGAAAATCGAGCCATGAGGGAGACCATTAAGAAGGCATGTTGCTCCAACTGTGGCTTCGCAACCTCTAGCAGAGACGCGACTATGACGACCGAGGAACAACAGCTACGAATCGAAAATGCAAGGCTCAAAGCTGAGATTGAAAAATTACGAGCAGCTGGCGGAAAATACCCTACCGGGACGGCGTCACCGAGCTCGTCATGCTCTGCGGGAAATGACCAAGAGAACAGAAGCTCGTTAGATTACTATAGCGGAATTTTTGGACTCGAAAAATCGAGGATTTTGGAAATAGTAAACCAAGCCATGGAAGAGCTCACAAAGATGGCTACAGCAGGTGATCCACTGTGGGTTCGAAGTGTTGAGACTGGTCGTGACATACTTAACTACGATGAGTACATTCGCGAGTTCTCGCCTGAGAATTCAGGAAATGGGGTCAGACGATCCATTGAGGCATCTAGAGAGAATGGTGTTGTGTTTGTGGACATCCCCAGGCTAGTTCAAGCCTTCTTGGATGTGAACCAATGGAAGGACATGTTTCCTTGCATGATCTCGAAGGCAGCTACGGTTGATACTATCTGCAGTGGTGAAGGCCCCAACAGAAATGGCGCCGTACAACTAATGTTTGCAGAGCTACAAATGCTCACACCTATGGTGCCAACAAGAGAAGTATACTTCATCAGATATTGCAAGCAACAGAGCCCTGATCGTTGGGCAATCGTTGATGTCTCCATTGATAAAGTTGAAGACACCATCGACGCCTCACTTTCTAAATGTCGAAAACGCCCATCCGGTTGCATCATTGAGGACAAATCCAATGGCCATTGCAAGGTAACCTGGGTCGAGCACTTAGAATGCCAGAAAAGCCCGGTCCACACTATGTATCGATCGATCGTTAACAGTGGTCTAGCTTTTGGTGCAAGGCACTGGATGACAACATTGCAGCTTCAATGTGAGAGGCTTGTTTTCTTCATGGCAACAAATGTTCCCACAAAAGATTCAAGTGGGGTTGCGACATTGGCGGGAAGAAAAAGTATTTTGAAGTTGGCGCAACGGATGACATGGAGTTACTGTCGCGCGGTTGGAGCATCAAGCTATCATACATGGACGAAGCTCTCGACGAAAGGGGGAGACGATATAAGGGTGGCTTCTAGGAAGAATTTGAATGATCCAGGAGAACCTCTAGGGGTGATCCTGTGTGCAGTTTCATCTGTATGGTTACCTGTCTCTCACATTGCCCTATTCGATTTCTTACGAGACGAAGCTAGGCGGACCGAGTGGGATATCATGTCAACTGGAGGCCCAGTACAATCCATCGCAAACTTAGCCAAAGGACAAGATCGCGGCAACGCCGTAACAATCCAAGCGATGAAATCGAAAGAGAGCAGTATGTGGATACTCCAGGATAGTTGCACGAACGCGTTTGAATCCACGGTAGTTTACGCTCCTGTGGACATCACTGGCATGCAATCAGTGATGACGGGATGCGACTCGAGCAACATTGCGATATTGCCTTCAGGGTTCTCAATTCTTCCGGACGGGATCGAGACGAGGCCATTAGTGATCACTTCAAGGCTAGAGGAGAAGAGCATGGAAGGGGGATCCTTGCTTACTATAGCATTTCAAATCCTAGCTAATACTTCTCCCACAGCTAAATTAACTATGGAGTCTGTGGAAACTGTTAACACTCTTTTATCTTGTACACTGCAGAATATTAAGAAAAGCTTGCAATGTGAGGATGGATGA 2298 0.4782 MPLKTTLSSSKTLTVMGVEMSNPPTSRTKDFFASPALSLTLAGVFRDAGAAAASSMEVEEGDEESGGGGGQEGTVEISSENTGPGRSDDDADADGVQEEDGEEDKSKKKKRKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKKLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKSEMDKLRDENRAMRETIKKACCSNCGFATSSRDATMTTEEQQLRIENARLKAEIEKLRAAGGKYPTGTASPSSSCSAGNDQENRSSLDYYSGIFGLEKSRILEIVNQAMEELTKMATAGDPLWVRSVETGRDILNYDEYIREFSPENSGNGVRRSIEASRENGVVFVDIPRLVQAFLDVNQWKDMFPCMISKAATVDTICSGEGPNRNGAVQLMFAELQMLTPMVPTREVYFIRYCKQQSPDRWAIVDVSIDKVEDTIDASLSKCRKRPSGCIIEDKSNGHCKVTWVEHLECQKSPVHTMYRSIVNSGLAFGARHWMTTLQLQCERLVFFMATNVPTKDSSGVATLAGRKSILKLAQRMTWSYCRAVGASSYHTWTKLSTKGGDDIRVASRKNLNDPGEPLGVILCAVSSVWLPVSHIALFDFLRDEARRTEWDIMSTGGPVQSIANLAKGQDRGNAVTIQAMKSKESSMWILQDSCTNAFESTVVYAPVDITGMQSVMTGCDSSNIAILPSGFSILPDGIETRPLVITSRLEEKSMEGGSLLTIAFQILANTSPTAKLTMESVETVNTLLSCTLQNIKKSLQCEDG* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00095 765 SMART HOX_1 110 172 IPR001356 GO:0003677
Eupl09g00095 765 ProSitePatterns 'Homeobox' domain signature. 143 166 IPR017970 GO:0000981|GO:0006355
Eupl09g00095 765 Coils Coil 218 238 - -
Eupl09g00095 765 SUPERFAMILY Bet v1-like 547 756 - -
Eupl09g00095 765 SUPERFAMILY Bet v1-like 274 504 - -
Eupl09g00095 765 SMART START_1 281 504 IPR002913 GO:0008289
Eupl09g00095 765 SUPERFAMILY Homeodomain-like 102 169 IPR009057 -
Eupl09g00095 765 MobiDBLite consensus disorder prediction 49 119 - -
Eupl09g00095 765 FunFam Homeobox-leucine zipper protein HDG1 97 184 - -
Eupl09g00095 765 CDD START_ArGLABRA2_like 276 503 - -
Eupl09g00095 765 CDD homeodomain 115 166 IPR001356 GO:0003677
Eupl09g00095 765 ProSiteProfiles START domain profile. 272 507 IPR002913 GO:0008289
Eupl09g00095 765 Coils Coil 167 194 - -
Eupl09g00095 765 MobiDBLite consensus disorder prediction 244 260 - -
Eupl09g00095 765 FunFam Homeobox-leucine zipper protein GLABRA 2 281 503 - -
Eupl09g00095 765 Pfam START domain 282 504 IPR002913 GO:0008289
Eupl09g00095 765 ProSiteProfiles 'Homeobox' domain profile. 108 168 IPR001356 GO:0003677
Eupl09g00095 765 Gene3D - 279 504 IPR023393 -
Eupl09g00095 765 MobiDBLite consensus disorder prediction 239 260 - -
Eupl09g00095 765 Pfam Homeodomain 111 166 IPR001356 GO:0003677
Eupl09g00095 765 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 109 761 IPR042160 -
Eupl09g00095 765 Gene3D - 96 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00095 Eupl-Chr9 4262855 4267877 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00095 77 764 Homeobox Transcription Factor Family AT1G79840 64.448 0.0 915
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Eupl09g00095 START 3.9e-55 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00095 K09338 - ming:122068500 1240.33