Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00071 ATGCCATGTGGCGTTAAGTTAATTAACCCAGGGATTCTGGCAAAAGCATCCAAGAGGAACTCCAAAAAAAGAAGACCAGTAAGACGAACAGGGTGCAATGCACGGATGCTTATTCAATTGGAAAGTGATGAAAAATATGTTGTGGTCGAGTTTGAAGAGCAACACAACCATGAGCTTGTACCTCAATCTCAAGTGTATCTATTGAGGTCGTATCGAAATATTGAAAGTGCACAAGCTAGTTTAATCAATAATATGTACTCTTTAGGGTTGGGATCTAATAAGATATACTCATATATGAGCAAAGAAGCTGGAGGGTCTCAAAACCTCAATTTTACACGATCCGATTGTGATAACTTCGTACGAAGAAGGCGCATTGAGTTTTTGAAGCAAGGAGATGCAAGGCTCCTTTTAGATTACTTTAAGAGGATGCAAAAAGAAAATAATTCATTCTTTTACTTGATATGA 465 0.3763 MPCGVKLINPGILAKASKRNSKKRRPVRRTGCNARMLIQLESDEKYVVVEFEEQHNHELVPQSQVYLLRSYRNIESAQASLINNMYSLGLGSNKIYSYMSKEAGGSQNLNFTRSDCDNFVRRRRIEFLKQGDARLLLDYFKRMQKENNSFFYLI* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00071 154 Pfam FAR1 DNA-binding domain 17 61 IPR004330 -
Eupl09g00071 154 PANTHER OS01G0519700 PROTEIN 19 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00071 Eupl-Chr9 3624665 3626649 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl09g00071 FAR1 2.1e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00071 - - psom:113279328 167.162