Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00064 ATGTCGTCACCAACTCCAGCTCCCACATCGCCACCATCACCACCAGCATCGGCGCCACCGCCAACTAATTCCACTCCACCAACAGTACCAACTCCTGTCGTGTCTCCCCCACCTCCGACGACTCCCTCAACGTCGACTTCTCCACCGCCTCCTTCAACAACCCCAGCCTCCTCACCGCCACCAACGCCGGCTTCGACGACGTCTCCACCGCCTCCCTCCGGTTCTTCGACTCCGGGGACTCTAGAGAGTCCGCCACCACCTCTGCCGCCGGCTACCGGAGAATCGCCTCCGTCTCCGCCTAATATGTCGACGGGGATCATTGTTGGTATTACAATTGGGGGAGTGGCAGTGTTTGTTGTCTTGGGTTTGCTGTTTATTTGTTTAAAGAAGAAGAGGAGGAGAGATCATGGACCATTGGATTACTACGGACAACCGCCTCCAGGGCCGAAAGACGGCCCTTATGGTGGGCAGCCCCAACAATGGCAACACAATGCTCCTCCCCCACCAACAGACCAGGTTGTCTCAATGCTACCAAAGCCCACTCCCCCACCAGGAGTTGCATCACGACCACCACAGTCACCAGGCCGCATCCCGACGCCCCCGACACCACCTCCGCCTCCGCTCATGAGCAGCAGTGGAGGTTCTGGGTCCAATTATTCAGGGTCTGAGAACCCACACCCACCACCATCCCCTGGCATTGCCTTAGGTTTCTCAAAGAGCACATTTACATATGAAGAATTAGCAATGGCAACAAATGGCTTTTCAGACGCCAACCTTCTCGGACAAGGTGGTTTTGGGTATGTCCATAAAGGAATCCTTCCAAATGGAAAAGAAGTTGCAGTTAAGCAGCTAAAAGCTGGAAGCGGGCAAGGGGAGCGTGAATTTCAGGCGGAGGTTGAGATTATTAGCAGAGTACATCATAAACATCTCGTAACATTGGTTGGATACTGCAGTACAGGAGCGCAAAGAATGCTTGTTTATGAGTTTGTTCCAAACAACACCATGGAGTTCCACTTACATGGAAAGGAACGACCAACTATGGAATGGGCCACCAGACTGAAAATTGCACTAGGGTCTGCAAAAGGACTTGCATATCTACACGAAGATTGCCATCCTAAAATTATTCATCGTGATATCAAGGCATCTAATATTCTTCTTGATTTTAAATTTGAGGCAAAGGTTGCAGATTTTGGACTTGCAAAACTTTCTTCTGATACCAACACCCATGTCTCCACCCGTGTAATGGGAACTTTCGGGTATCTGGCTCCAGAATATGCATCGAGCGGGAAACTCACTGATAAATCGGATGTCTTTTCTTTTGGGGTCATGCTCCTAGAGTTGATTACTGGACGCCGACCCATTGATTCAAGTCAATACTTCATGGATGATAGTTTGGTAGACTGGGCAAGGCCGTTGCTCACACGAGCACTGGATGATGGCAACTATGATACACTTGTAGATTCAAAGTTGCAGAAGGACTACAACCCCAACGAGATGTCACGTATGGTTGCTTGCGCTGCTGCTTGTGTGCGCCATTCTGCACGGCGTCGACCACGAATGAGCCAGGTAGTCAGGGCACTGGAAGGTGACGTGTCTCTGTCTGACCTAAATGAAGGCATCAGACCTGGACACAGCACAGTTTATAGTTCCTATGGAAGCTCAGATTATGACACCAGCCAGTACAATGAGGACATGAAGAAATTCAGGAAGATGGCATTGGCCAGCCAGGAGCATGGTAGCAGCGAATATAGTGCACCAACCAGTGAGTACGGTATGCACCCGTCTGGCTCGAGCAGTGAAGCACAAACCACCCAAGAGATGGAGATGGGGAAGATGAAGAAAGAGAGTCAAGGTTTCAATGGAAGCTCTTGA 1872 0.5053 MSSPTPAPTSPPSPPASAPPPTNSTPPTVPTPVVSPPPPTTPSTSTSPPPPSTTPASSPPPTPASTTSPPPPSGSSTPGTLESPPPPLPPATGESPPSPPNMSTGIIVGITIGGVAVFVVLGLLFICLKKKRRRDHGPLDYYGQPPPGPKDGPYGGQPQQWQHNAPPPPTDQVVSMLPKPTPPPGVASRPPQSPGRIPTPPTPPPPPLMSSSGGSGSNYSGSENPHPPPSPGIALGFSKSTFTYEELAMATNGFSDANLLGQGGFGYVHKGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVTLVGYCSTGAQRMLVYEFVPNNTMEFHLHGKERPTMEWATRLKIALGSAKGLAYLHEDCHPKIIHRDIKASNILLDFKFEAKVADFGLAKLSSDTNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPIDSSQYFMDDSLVDWARPLLTRALDDGNYDTLVDSKLQKDYNPNEMSRMVACAAACVRHSARRRPRMSQVVRALEGDVSLSDLNEGIRPGHSTVYSSYGSSDYDTSQYNEDMKKFRKMALASQEHGSSEYSAPTSEYGMHPSGSSSEAQTTQEMEMGKMKKESQGFNGSS* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00064 623 MobiDBLite consensus disorder prediction 171 210 - -
Eupl09g00064 623 FunFam Proline-rich receptor-like protein kinase PERK1 330 538 - -
Eupl09g00064 623 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 115 582 IPR047117 -
Eupl09g00064 623 PRINTS Proline rich extensin signature 51 72 - -
Eupl09g00064 623 PRINTS Proline rich extensin signature 16 32 - -
Eupl09g00064 623 PRINTS Proline rich extensin signature 2 14 - -
Eupl09g00064 623 PRINTS Proline rich extensin signature 39 51 - -
Eupl09g00064 623 MobiDBLite consensus disorder prediction 1 101 - -
Eupl09g00064 623 SMART serkin_6 254 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00064 623 Gene3D Transferase(Phosphotransferase) domain 1 330 537 - -
Eupl09g00064 623 ProSiteProfiles Protein kinase domain profile. 254 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00064 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 374 386 IPR008271 GO:0004672|GO:0006468
Eupl09g00064 623 ProSitePatterns Protein kinases ATP-binding region signature. 260 282 IPR017441 GO:0005524
Eupl09g00064 623 MobiDBLite consensus disorder prediction 1 97 - -
Eupl09g00064 623 Pfam Protein tyrosine and serine/threonine kinase 259 527 IPR001245 GO:0004672|GO:0006468
Eupl09g00064 623 Gene3D Phosphorylase Kinase; domain 1 233 329 - -
Eupl09g00064 623 MobiDBLite consensus disorder prediction 577 606 - -
Eupl09g00064 623 SUPERFAMILY Protein kinase-like (PK-like) 229 527 IPR011009 -
Eupl09g00064 623 MobiDBLite consensus disorder prediction 135 234 - -
Eupl09g00064 623 FunFam proline-rich receptor-like protein kinase PERK1 232 329 - -
Eupl09g00064 623 MobiDBLite consensus disorder prediction 577 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00064 Eupl-Chr9 3541661 3547150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00064 71 600 Trihelix Transcription Factor Family AT1G70460 50.738 1.69e-169 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Eupl09g00064 PK_Tyr_Ser-Thr 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00064 - - nnu:104592196 812.372