Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00055 ATGGGAAAAGGAACGGGAAGCTTTGGTAAGAGGAGGAACAAGACTCACACACTCTGTGTGAGGTGCGGACGCCGCAGCTTTCATCTTCAGAAGAGCAGATGCTCCGCTTGTGGTTTTCCTTCTTGCCGAATCAGAACATATAATTGGAGTGTGAAGGCGATTAGGAGGAAGACCACCGGAACCGGTCGGATGAGGTACCTCCGCCATGTCCCTCGCAGATTCAAGAGTAACTTCAGAGAAGGAGTAGTACAGGAATACTCACCTGTTGTCCGTGGACTGCGCCTTTTGGCATTTGGGGTGGTGGAAGGTAGATTATGCCCTGATGAAGTCTCCTTTACATGGCATCTCCTCTACTCAGCCTACCAAAACCCTTCCCTTCCAGCACATGTAATGAACCCTCACTCCACAACTTTTCTCATCCCACCAAACCCTCCCCTTTCAGCAGAGGATCAAATGGGCAATGGCAATGGCCATGTTGATGGGAAACGGCTACGACAAAGTGATGGCCGGGGGACCTTTGTCTCGGTTTGA 531 0.5085 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACGFPSCRIRTYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSNFREGVVQEYSPVVRGLRLLAFGVVEGRLCPDEVSFTWHLLYSAYQNPSLPAHVMNPHSTTFLIPPNPPLSAEDQMGNGNGHVDGKRLRQSDGRGTFVSV* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00055 176 SUPERFAMILY Zn-binding ribosomal proteins 1 55 IPR011332 GO:0006412
Eupl09g00055 176 Hamap 50S ribosomal protein L37e [rpl37e]. 2 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Eupl09g00055 176 ProSitePatterns Ribosomal protein L37e signature. 4 23 IPR018267 GO:0003735|GO:0005840|GO:0006412
Eupl09g00055 176 Pfam Ribosomal protein L37e 3 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Eupl09g00055 176 PANTHER 60S RIBOSOMAL PROTEIN L37 1 85 - -
Eupl09g00055 176 MobiDBLite consensus disorder prediction 148 176 - -
Eupl09g00055 176 Gene3D - 1 87 IPR011331 GO:0003735|GO:0005840|GO:0006412
Eupl09g00055 176 FunFam Ribosomal protein L37 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00055 Eupl-Chr9 3325824 3329919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00055 1 82 Cytoplasmic Ribosomal Protein Gene Family AT1G15250 86.585 2.29e-48 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00055 K02922 - mof:131157762 169.859