Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00054 ATGGACGACATAGATGAAGCCATGGTGCCACCAAAGTCTGAGGAAGACGGTGAGTTCAGGCCTTACTTTCCTCAGAAGATTGAAGATGAAGGAGTCCTCACTAAGCTTGGTTTGAAGAAGAAGCTTGTCAAAGTTGGAGAAGGATGGGAGGCTCCAGAACAAGGAGACGAGATCACTGTGAATTACACGGGTACGGTGTTGGGTGGTGCGCAGTTCGCTTCGAGCATAGACAAGGGGGAGCCATTGGTTGTTGTGATCGGAAAGGACAACATACTAAAAGGGTGTGAGGAGGGCCTTATTACTATGAGGAAGGGAGAGATCTCCATCTTCACTTTTTCCCCTCCATTGACTCAAGGAATTCATGATCTCTTCCCCCATATCCCACTCGACGCGACCCTACAGTTCCAGGTTGAATTGATATCCTGGTTCAAAGTTGTAGATGTCTGTAAAGATGGTGGAATTATGAAGAAAATTTTACATAAAAGTGAGGTGTTAGAGCGAGCAGAGAAGAAAGATGAAGTGACAGTGAAATACGAAGTGAAACTCAAGGATGGTAGTCTTGTGGCGAAATCAACGGAAGATGGAGTTGAATTTCTTGTGAATGATGGTCACCTATGTCCTGCCATTGCAAAGACTGTGGTAACCATGAGGAAGGGAGAACAGGCAATCTTAAGAGTCGATCCCCGATATGCATTTGGTGATATCGGGAGACCTGCACAAGATGGTCTATCTGCAGTCCCAACAAATACAGTTGTTAATATCTCCTTGGAACTGGTTGCTTATAAACTTCTCGAATATGCTACGGATGATATGTTGGTTATCAAGAAAATCACCAGTGCTGGTGTAGGTTTCGAGAAGCCAAATAGTGGAACCATGGCTCAGATTAGGTACATTGCTAAACTCTCTGATGGCAAGATCTTCGACAAAAAGGGATATGATGGGGAGGACCCATTTGAATTCAAAGTTGATGAAGAACAAGTTATCGAAGGCCTCGATCTGGCAGTTGCTACCATGAAACGAGAAGAGGCTGCTCTGGTCATTATCAATCATGAGTATGGTTTTGGGGACACTGAAACCAAAACGAAGTTGGCTGTTGTCCCTGCACGTTCAACTTTGTATTATGAAGTCGAGGTGGTAGGATTTACAAAGGTAACGGAATCATGGGACATGGAACCAGAAGAGAAGCTTGAATACGCAGCCAAACGTAAAGAGGAAGGAAATGCTTACTTCAAGGGTGGAAATTATCGGCGGGCTTCATTGAGATATGATATGGCAGCAAAATATGTGGAGTTTGATAGCACTTTCAGTGACGAGCAAAAGAAGATGGGGAAGTTTTTTAAAGTCTCTTGCAATCTGAACAATGCTGCATGCAAACTTAAGTTGAAGGAGTTTAATGAAGCTGCTAAGCTGTGCTCAAAGGTATTGAACCTGGAACCTAACAATGTGAAAGCACTTTTCCGGAGAGCTCAAGCATACATGGAAACGATTGATTTGGATATGGCTGAGCTGGACTTGAAGAAAGCAAGTGTAATCGATCCTAATAATGGGGAGGTGATGCAACAGTTTCTACGACTAAAGAGCTTAAAGTCTTACCATGACAAGCAAGACTCAAAGATTTATGCAAACATTATTGAAAAGCTGAAAATATAA 1650 0.4303 MDDIDEAMVPPKSEEDGEFRPYFPQKIEDEGVLTKLGLKKKLVKVGEGWEAPEQGDEITVNYTGTVLGGAQFASSIDKGEPLVVVIGKDNILKGCEEGLITMRKGEISIFTFSPPLTQGIHDLFPHIPLDATLQFQVELISWFKVVDVCKDGGIMKKILHKSEVLERAEKKDEVTVKYEVKLKDGSLVAKSTEDGVEFLVNDGHLCPAIAKTVVTMRKGEQAILRVDPRYAFGDIGRPAQDGLSAVPTNTVVNISLELVAYKLLEYATDDMLVIKKITSAGVGFEKPNSGTMAQIRYIAKLSDGKIFDKKGYDGEDPFEFKVDEEQVIEGLDLAVATMKREEAALVIINHEYGFGDTETKTKLAVVPARSTLYYEVEVVGFTKVTESWDMEPEEKLEYAAKRKEEGNAYFKGGNYRRASLRYDMAAKYVEFDSTFSDEQKKMGKFFKVSCNLNNAACKLKLKEFNEAAKLCSKVLNLEPNNVKALFRRAQAYMETIDLDMAELDLKKASVIDPNNGEVMQQFLRLKSLKSYHDKQDSKIYANIIEKLKI* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00054 549 SUPERFAMILY FKBP-like 150 261 - -
Eupl09g00054 549 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 55 143 IPR001179 GO:0003755
Eupl09g00054 549 Gene3D - 264 384 IPR046357 GO:0003755
Eupl09g00054 549 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 171 262 IPR001179 GO:0003755
Eupl09g00054 549 SMART tpr_5 482 515 IPR019734 GO:0005515
Eupl09g00054 549 SMART tpr_5 399 432 IPR019734 GO:0005515
Eupl09g00054 549 SMART tpr_5 448 481 IPR019734 GO:0005515
Eupl09g00054 549 SUPERFAMILY FKBP-like 32 142 - -
Eupl09g00054 549 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 290 382 IPR001179 GO:0003755
Eupl09g00054 549 SUPERFAMILY FKBP-like 261 401 - -
Eupl09g00054 549 Gene3D - 29 145 IPR046357 GO:0003755
Eupl09g00054 549 Gene3D - 146 262 IPR046357 GO:0003755
Eupl09g00054 549 PANTHER PEPTIDYLPROLYL ISOMERASE 145 250 - -
Eupl09g00054 549 Gene3D Tetratricopeptide repeat domain 385 542 IPR011990 GO:0005515
Eupl09g00054 549 FunFam Peptidylprolyl isomerase 264 384 - -
Eupl09g00054 549 SUPERFAMILY TPR-like 387 530 IPR011990 GO:0005515
Eupl09g00054 549 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 50 140 IPR001179 GO:0003755
Eupl09g00054 549 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 286 378 IPR001179 GO:0003755
Eupl09g00054 549 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 167 238 IPR001179 GO:0003755
Eupl09g00054 549 ProSiteProfiles TPR repeat profile. 482 515 IPR019734 GO:0005515
Eupl09g00054 549 FunFam Peptidylprolyl isomerase 387 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00054 Eupl-Chr9 3314408 3318358 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00054 21 547 Calmodulin-binding Proteins AT5G48570 53.019 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00054 K09571 - nnu:104592205 901.353