Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00045 ATGGATTTCTGGCCGGAGTTCCTTGCAAGCAGTTGGTGCAGAGAACTTGTAGCGGGAGGGTTCGGGGGTATGGCCGGTGTCATATCCGGTTACCCGCTTGACACCCTCAGGATCCGTCTCCAACAGCCTTCCAATACTAGCTCTGCCTTCAGCCTCCTCCGCGGCCTTGTTGCCTCTGAAGGACCTTCAGCACTCTACAGAGGCATGGGAACACCATTGGCTTCTGTCACTTTCCAGAATGCCATCGTCTTCCAGGTCTATGCCATACTTTCACGAGTATTTGATTCATCACATAACTGCAACGATCCTCCTTCCTACAGAAGTGTTGCAATGGGAGGTGTAGGAACAGGTGCTTTGCAGAGCTTGATGCTCAGCCCTGTTGAACTTGTGAAGATACGTCTCCAATTACAGACAGGAGGGCACCCACACCACATTCAAGATCGTCATCTGGAAGGACCAGTAAGCGTGGCTAAGAGAATTCTGAGGAGGGAAGGAGTAAGGGGGATATACCGAGGCCTAACCATTACTATGCTCCGAGATGCACCTGCCCATGGTGTCTACTTTTGGACCTACGAATACACACGAGAGCAGCTCCACCCAGGCTGCCGACAAAGCGGCCAAGAGAGCGTGACAACAATGCTGGCTGCGGGAGGGCTGGCTGGAGTCGCCAGTTGGTTGTGTTGCTATCCCTTGGATGTGATCAAGTCCAGACTCCAGGGCCAAGTGCAATCCCTGTGCGACGATCCCCCACCCAAATACCAAGGCATCCTAGATTGCCTTCGCAAGAGTGTACGAGAAGAAGGCTATGGTGTACTGTGGAGGGGACTGGGGACTGCCATTGCCCGGGCTTTTGTGGTTAATGGGGCTGTCTTTGCTGCCTATGAGATAGCTCTGAGGTGCATATCTAATAATAACAACCATGGAACCAATGAAACAGAAGAGGACAGACTGTAG 954 0.5241 MDFWPEFLASSWCRELVAGGFGGMAGVISGYPLDTLRIRLQQPSNTSSAFSLLRGLVASEGPSALYRGMGTPLASVTFQNAIVFQVYAILSRVFDSSHNCNDPPSYRSVAMGGVGTGALQSLMLSPVELVKIRLQLQTGGHPHHIQDRHLEGPVSVAKRILRREGVRGIYRGLTITMLRDAPAHGVYFWTYEYTREQLHPGCRQSGQESVTTMLAAGGLAGVASWLCCYPLDVIKSRLQGQVQSLCDDPPPKYQGILDCLRKSVREEGYGVLWRGLGTAIARAFVVNGAVFAAYEIALRCISNNNNHGTNETEEDRL* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00045 317 PRINTS Mitochondrial carrier protein signature 119 137 IPR002067 GO:0055085
Eupl09g00045 317 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Eupl09g00045 317 PRINTS Mitochondrial carrier protein signature 170 188 IPR002067 GO:0055085
Eupl09g00045 317 PRINTS Mitochondrial carrier protein signature 217 239 IPR002067 GO:0055085
Eupl09g00045 317 FunFam Mitochondrial arginine transporter BAC2 11 311 - -
Eupl09g00045 317 Gene3D Mitochondrial carrier domain 15 315 IPR023395 -
Eupl09g00045 317 SUPERFAMILY Mitochondrial carrier 11 295 IPR023395 -
Eupl09g00045 317 Pfam Mitochondrial carrier protein 11 95 IPR018108 -
Eupl09g00045 317 Pfam Mitochondrial carrier protein 208 304 IPR018108 -
Eupl09g00045 317 Pfam Mitochondrial carrier protein 106 198 IPR018108 -
Eupl09g00045 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 300 IPR018108 -
Eupl09g00045 317 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 10 301 - -
Eupl09g00045 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 93 IPR018108 -
Eupl09g00045 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 197 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00045 Eupl-Chr9 2688891 2692426 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00045 1 305 Antiporters AT1G79900 68.197 9.09e-145 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00045 K15109 - nnu:104592218 493.812