Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl09g00035 | ATGGAAACTAACAATCTTGTAGCACCGTTCGTGTTGAAGACATATCAGATGGTGAACGATCCGTCGACGGATTCGCTAATCGCATGGGGAAGAGCGAACAATAGCTTCATCGTGAACGATCCGTTAGATTTCTCAAAGAGGCTCTTACCAGCATATTTCAAGCACAACAATTTCTCAAGCTTTGTTCGTCAGCTCAACACCTACGGCTTCAAAAAGGTGGATCCAGATAGATGGGAATTCGCGAACGAGTTTTTTCTTCGAGGCCAGAAGCAATTACTGAAGAACATAGTTCGAAAGAAGCAGAGTCGAAATTCTTACTTGCCTCGACCAAGACACGAGGAGGAGGATGAGAAAGAGGAGATACTTATGGAACTTGCAAGGTTGAAACATGAGCAGAAAGCTTTAGAAGAAGAGGTTGAAGGGATGAACAAACGTTTAGAGGTGACAGAGAGACGACCGCATCAAATGATGTCTTTTCTTTTTAAAGTGGTGGAGGATCCAGATATTCTCCCTCGAATGATGCTTGAAAGAGAGACGACAAAGCGATTAGGAGACAAAAAAAGACGTCTGATGATCTCATCTTCTTCTTCATCAGGACCAGCAACTACGACGACGACGGAGGAGGAAGAGGGGGATGGACATGCAACTTTTGTTACTGAATTAGGCAGATTTTGTCCATCATCATCGTCGGATTCATCGTCTTGGTTGAGCCAGAATCTAACTAGACCAGGGTCCTGCACCGTCACACCTGATAATACCGCACCCTCACACCTGATAGATCCTAATTCCGATTATGGTAATCAAATGATCTTCATTCCAGAATTGGGAGGAGGGGTGAAGGTAAACACTCCACCTTACCCTTTCTCCCTCTTAGGAGGTGGTTTTTAA | 888 | 0.4437 | METNNLVAPFVLKTYQMVNDPSTDSLIAWGRANNSFIVNDPLDFSKRLLPAYFKHNNFSSFVRQLNTYGFKKVDPDRWEFANEFFLRGQKQLLKNIVRKKQSRNSYLPRPRHEEEDEKEEILMELARLKHEQKALEEEVEGMNKRLEVTERRPHQMMSFLFKVVEDPDILPRMMLERETTKRLGDKKRRLMISSSSSSGPATTTTTEEEEGDGHATFVTELGRFCPSSSSDSSSWLSQNLTRPGSCTVTPDNTAPSHLIDPNSDYGNQMIFIPELGGGVKVNTPPYPFSLLGGGF* | 296 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl09g00035 | 295 | PANTHER | HEAT SHOCK TRANSCRIPTION FACTOR | 7 | 213 | IPR027725 | - | |
Eupl09g00035 | 295 | Gene3D | - | 2 | 100 | IPR036388 | - | |
Eupl09g00035 | 295 | ProSitePatterns | HSF-type DNA-binding domain signature. | 49 | 73 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Eupl09g00035 | 295 | MobiDBLite | consensus disorder prediction | 190 | 206 | - | - | |
Eupl09g00035 | 295 | Coils | Coil | 111 | 152 | - | - | |
Eupl09g00035 | 295 | SUPERFAMILY | "Winged helix" DNA-binding domain | 7 | 99 | IPR036390 | - | |
Eupl09g00035 | 295 | MobiDBLite | consensus disorder prediction | 229 | 255 | - | - | |
Eupl09g00035 | 295 | PRINTS | Heat shock factor (HSF) domain signature | 48 | 60 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Eupl09g00035 | 295 | PRINTS | Heat shock factor (HSF) domain signature | 61 | 73 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Eupl09g00035 | 295 | PRINTS | Heat shock factor (HSF) domain signature | 10 | 33 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Eupl09g00035 | 295 | FunFam | Heat stress transcription factor B-4 | 2 | 100 | - | - | |
Eupl09g00035 | 295 | MobiDBLite | consensus disorder prediction | 188 | 212 | - | - | |
Eupl09g00035 | 295 | SMART | hsfneu3 | 6 | 99 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Eupl09g00035 | 295 | Pfam | HSF-type DNA-binding | 10 | 99 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl09g00035 | Eupl-Chr9 | 2272551 | 2273926 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl09g00035 | 6 | 198 | HSF | AT3G24520 | 65.306 | 4.75e-88 | 264 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HSF | Eupl09g00035 | HSF_DNA-bind | 8.9e-31 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl09g00035 | K09419 | - | nnu:104592212 | 328.561 |