Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00035 ATGGAAACTAACAATCTTGTAGCACCGTTCGTGTTGAAGACATATCAGATGGTGAACGATCCGTCGACGGATTCGCTAATCGCATGGGGAAGAGCGAACAATAGCTTCATCGTGAACGATCCGTTAGATTTCTCAAAGAGGCTCTTACCAGCATATTTCAAGCACAACAATTTCTCAAGCTTTGTTCGTCAGCTCAACACCTACGGCTTCAAAAAGGTGGATCCAGATAGATGGGAATTCGCGAACGAGTTTTTTCTTCGAGGCCAGAAGCAATTACTGAAGAACATAGTTCGAAAGAAGCAGAGTCGAAATTCTTACTTGCCTCGACCAAGACACGAGGAGGAGGATGAGAAAGAGGAGATACTTATGGAACTTGCAAGGTTGAAACATGAGCAGAAAGCTTTAGAAGAAGAGGTTGAAGGGATGAACAAACGTTTAGAGGTGACAGAGAGACGACCGCATCAAATGATGTCTTTTCTTTTTAAAGTGGTGGAGGATCCAGATATTCTCCCTCGAATGATGCTTGAAAGAGAGACGACAAAGCGATTAGGAGACAAAAAAAGACGTCTGATGATCTCATCTTCTTCTTCATCAGGACCAGCAACTACGACGACGACGGAGGAGGAAGAGGGGGATGGACATGCAACTTTTGTTACTGAATTAGGCAGATTTTGTCCATCATCATCGTCGGATTCATCGTCTTGGTTGAGCCAGAATCTAACTAGACCAGGGTCCTGCACCGTCACACCTGATAATACCGCACCCTCACACCTGATAGATCCTAATTCCGATTATGGTAATCAAATGATCTTCATTCCAGAATTGGGAGGAGGGGTGAAGGTAAACACTCCACCTTACCCTTTCTCCCTCTTAGGAGGTGGTTTTTAA 888 0.4437 METNNLVAPFVLKTYQMVNDPSTDSLIAWGRANNSFIVNDPLDFSKRLLPAYFKHNNFSSFVRQLNTYGFKKVDPDRWEFANEFFLRGQKQLLKNIVRKKQSRNSYLPRPRHEEEDEKEEILMELARLKHEQKALEEEVEGMNKRLEVTERRPHQMMSFLFKVVEDPDILPRMMLERETTKRLGDKKRRLMISSSSSSGPATTTTTEEEEGDGHATFVTELGRFCPSSSSDSSSWLSQNLTRPGSCTVTPDNTAPSHLIDPNSDYGNQMIFIPELGGGVKVNTPPYPFSLLGGGF* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00035 295 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 7 213 IPR027725 -
Eupl09g00035 295 Gene3D - 2 100 IPR036388 -
Eupl09g00035 295 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl09g00035 295 MobiDBLite consensus disorder prediction 190 206 - -
Eupl09g00035 295 Coils Coil 111 152 - -
Eupl09g00035 295 SUPERFAMILY "Winged helix" DNA-binding domain 7 99 IPR036390 -
Eupl09g00035 295 MobiDBLite consensus disorder prediction 229 255 - -
Eupl09g00035 295 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl09g00035 295 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl09g00035 295 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl09g00035 295 FunFam Heat stress transcription factor B-4 2 100 - -
Eupl09g00035 295 MobiDBLite consensus disorder prediction 188 212 - -
Eupl09g00035 295 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl09g00035 295 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00035 Eupl-Chr9 2272551 2273926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00035 6 198 HSF AT3G24520 65.306 4.75e-88 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Eupl09g00035 HSF_DNA-bind 8.9e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00035 K09419 - nnu:104592212 328.561