Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00023 ATGCCGGATTTGCGAAGTGGAGTTCGCCAGCCTCGTTTGAAATCAAAGCAGGTTGATGATATCCAGCCAGTTCCTGCTGTGAATCCAATAAGGACAACCAGGCGTGGTGCTGGAAGGGGAAATGGCTCCAATGTTCCACTGAAATTACCTCTTGCTGAGCAAGTTAAGCCTGTTGTTGTTTCTCCAAGGGCAAGGGCAGCTGGTAGAGGACGAAGGTTAAAAGCAACAAATCAAGATAAGCCTTGTGAACTTTTGGGTGCTCCAATTAGAGACGGGGGTTGCACAGGTTTGGACGTGGCAATGAGAGAGGTGGTTGCCATTTGTGATGAGGTGGTGGCAGAGCGGAATGCAGAAAAGTTGGTTGCTGTTGAGGAGGAAGGAAGCACAAGCCCGCTTCCTGAAAGGGTACAGCTAGGTAACTCCCCTATTTACAAGTTAGATAGAAAATTGGGAAAAGGGGGCTTTGGGCAAGTTTATGTTGGAAGAAGGGTGGCTGGTGGCATAGGGCGCATGGGACCTGATGCCTTTGAGGTTGCTTTGAAGTTTGAGCATCAAAATAGTAAGGGATGCAATTATGGCCCTCCTTACGAGTGGCAAGTATACAGTACTCTTAATGGTTGTTATGGACTTCCCTTGGTCCATCACAAGGGCCGCCAAGGAGACTACTATATTCTTGTCATGGACATGCTTGGTCCAAGTCTATGGGATGTCTGGAACTCTAACAACCAAATGTTGTCTGAAGAGATGGTTGCTTGTATAGCAGTGGAGGCAATATCAATACTAGAGAAGCTTCACTTGAGAGGATTTGTGCATGGAGACGTAAAGCCAGAGAATTTTCTGCTTGGTCAGCCTGGAACCCCTGATGAGAAGAAGCTGTATCTAGTAGATCTTGGTTTGGCATCTAGATGGAAGGATACATCATCTGGTCGTCATGTTGATTATGACCAAAGGCCTGATGTTTTCAGGGGGACAGTACGTTATGCAAGTGTACATGCTCATTTGGGTCGGACAGGAAGCAGAAGGGATGACCTTGAGTCATTGGCATACACCCTAATATTTCTCCTCAAAGGGAAGCTTCCCTGGCAAGGTTTTCTTGGAGAGAACAAAGGATTTCTTGTTTGTAAGAAGAAGATGGCAACTTCCCCTGAGATGCTTTGTTGCTTCTGCCCATTCCCATTTCAACAATTTCTCGAGATGGTGACCAATATGAAATTTGATGAAGAACCAGATTACTCAAAGCTCATTTCCCTTTTCGAACACAGTATTGGATCCAATGCATCACTGCGACCTATTAGAACTGATGGGGCTCTAAAGGTGGGGCAGAAAAGGGGAAGATTGGTCGAGTTGGAAGATGACGGTCAAACTAAGAAGAAAGTTCGACTGGGTACTCCAGCTACTCAGTGGATCTCAGTCTATAATTCTAGATCATCAATGAAGCAGAGATATCATTACAATGTAATGGATTCGAGACTTCACCAACATGTGGAGAAAGGAAAGGAAGATGGTTTGTACATTAGTTGTGTAGCTTCGTCAGCAAATCTGTGGGCTGTCATTATGGATGCTGGAACAGGGTTCACTTCTCAGGTTTATGAACTCTCACCTATTTTCTTGCGCAAGGACTGGATCATGGAACAGTGGGATAAGAATTATTATATCAGTTCAGTGGCTGGGGCATCCAATGGCAGTGCCTTGGTGGTAATGTCCAAGGGTACTCCCTACACTCAGCAGTCGTACAAAGTTAGTGATGTATTTCCTTTCAAATGGATCAATAAGAAGTGGAAAGAGGGGTTCTTTGTTACCTCCATGACCACTGCAGGTAGCAGATGGGGCATCATCATGTCAAGAAATGCAGGCTATTCTAATCAGGTTGTTGAACTTGATTTCCTCTACCCAAGTGAAGGCATCCATAGACGGTGGGAGAATGGATACCGGATTACATCAACTGCCGCGACGACAGATCAAGCTGCATTCATACTCAGTGTACCCAAAAGGAAAACACCAGATGTGACACAAGAAACATTACGTACATCTGCTTTTCCTAGTAACCATGTTAAGGATAAATGGTCAAAGAATCTGTATATTGCATCCATCAGCTATGGGAGAACAGTGTCCTGA 2115 0.4501 MPDLRSGVRQPRLKSKQVDDIQPVPAVNPIRTTRRGAGRGNGSNVPLKLPLAEQVKPVVVSPRARAAGRGRRLKATNQDKPCELLGAPIRDGGCTGLDVAMREVVAICDEVVAERNAEKLVAVEEEGSTSPLPERVQLGNSPIYKLDRKLGKGGFGQVYVGRRVAGGIGRMGPDAFEVALKFEHQNSKGCNYGPPYEWQVYSTLNGCYGLPLVHHKGRQGDYYILVMDMLGPSLWDVWNSNNQMLSEEMVACIAVEAISILEKLHLRGFVHGDVKPENFLLGQPGTPDEKKLYLVDLGLASRWKDTSSGRHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLKGKLPWQGFLGENKGFLVCKKKMATSPEMLCCFCPFPFQQFLEMVTNMKFDEEPDYSKLISLFEHSIGSNASLRPIRTDGALKVGQKRGRLVELEDDGQTKKKVRLGTPATQWISVYNSRSSMKQRYHYNVMDSRLHQHVEKGKEDGLYISCVASSANLWAVIMDAGTGFTSQVYELSPIFLRKDWIMEQWDKNYYISSVAGASNGSALVVMSKGTPYTQQSYKVSDVFPFKWINKKWKEGFFVTSMTTAGSRWGIIMSRNAGYSNQVVELDFLYPSEGIHRRWENGYRITSTAATTDQAAFILSVPKRKTPDVTQETLRTSAFPSNHVKDKWSKNLYIASISYGRTVS* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00023 704 CDD STKc_CK1 144 418 - -
Eupl09g00023 704 SMART serkin_6 144 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00023 704 MobiDBLite consensus disorder prediction 1 47 - -
Eupl09g00023 704 PANTHER CASEIN KINASE-RELATED 144 674 - -
Eupl09g00023 704 ProSitePatterns Protein kinases ATP-binding region signature. 150 181 IPR017441 GO:0005524
Eupl09g00023 704 SUPERFAMILY Protein kinase-like (PK-like) 144 422 IPR011009 -
Eupl09g00023 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Eupl09g00023 704 ProSiteProfiles Protein kinase domain profile. 144 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00023 704 Gene3D Transferase(Phosphotransferase) domain 1 113 487 - -
Eupl09g00023 704 Pfam Protein kinase domain 144 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00023 Eupl-Chr9 1809227 1829888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00023 219 430 MAP Kinase Kinase Kinase Kinase AT3G15220 25.822 2.81e-08 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Eupl09g00023 Pkinase 3.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00023 - - nnu:104592236 1220.3