Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00019 ATGGCGACTCAGTGCAACAATGGCTCAGCAAGTCCCATCAAAATCCCGGAAATCAAGTTCACCAGCCTGTTTATCAATGGAGAGTTTGTGGACGCTGTTTCAGGGAAAACGTTTGAGACAATTGATCCAAGAACGGGAGAAGTGATATGTCGGGTAGCGGAAGGAGATAAAGAAGATGTTGACTTGGCTGTTAAAGCCGCTAGAGAAGCTTTCGACCATGGAAAATGGCCTCGCATGTCTGGCTTTGAGAGGGGAAGGATAATGATGAAATTCGCAGACTTAATAGACAAAAATGTAGAAGAATTGGCTGTTCTGGATACAATAGATGCTGGGAAGTTGTTCCACCATGGCAAGGTCTTAGACATCCCACATTCTGCGGACACTCTCCGGTACTATGCAGGAGCTGCTGATAAAATCCATGGAGAGACGTTAAAATTGTCACAGGAGATGCAGGGGTACACTTTGCGTGAACCCATCGGTGTTGTAGGACACATTATTCCCTGGAACTTTCCCTCTACCATGTTCTTCATGAAGGTTGCCCCTGCCTTAGCCGCTGGTTGCACTATGATAGTCAAGCCTGCAGAACAGACACCTCTTTCGGCTCTCTATTATGCACATCTCGCTAAGCTGGCTGGTATTCCTGATGGAGTGCTCAATGTTATTAATGGCTTTGGGCCCACGGCTGGTGCTGCCATTGCCTCTCACATGGATATTGATAAAGTTAGTTTTACAGGGTCCACAGAAGTTGGACGGTTAGTAATGCAGGCTGCAGCAACAAGCAATTTGAAGGTTGTTTCACTTGAATTAGGCGGGAAGTCACCTCTCGTAATTTTCGATGATGCTGATGTGGACACGGCCGTTAATCTTGCTCTATTGGGCATTTTATATAATAAGGGAGAAATTTGTGTAGCTGGATCTCGTGTTTATGTTCAAGAAGGGATATATGATGAATTTGTGAAGAAGTCAGTGGAAAAGGCGAAAACTTGGGTGGTGGGGGACCCTTTTGATTCTCATGTTCAACAAGGACCCCAGGTCGATAAGGTGCAGTTTGAGAAAATTCTTTCATACATTAAGCATGGCAAGAGTGAGGGAGCCACCTTGTTAACCGGCGGTAAACCCTGCGGTGAGAAGGGATACTACATCGAACCCACAATTTTTACAGACGTCAAGGAGGATATGTTAGTAGTGAAGGATGAAATATTTGGACCTGTCATGTCTCTCATGAAGTTCAAGACCGTTGAGGAAGCAATTGAGCGAGCTAACAAAACAAGATACGGTCTAGCAGCAGGAATTGTGACCAAAGACTTGAACATAGCCAACAGAGTCTCAAGATCGATCCGTGCCGGTGTCATTTGGATTAACTGCTACTTCGCTTTTGACAGGGACTGTCCTTTTGGTGGGTTTAAGATGAGTGGTTTTGGAAGGGATTCGGGACTGAACGCCCTCGATAAATATCTCCATGTCAAGTCTGTCGTAACTCCCATTTACAATTCCCCTTGGCTCTAA 1506 0.4535 MATQCNNGSASPIKIPEIKFTSLFINGEFVDAVSGKTFETIDPRTGEVICRVAEGDKEDVDLAVKAAREAFDHGKWPRMSGFERGRIMMKFADLIDKNVEELAVLDTIDAGKLFHHGKVLDIPHSADTLRYYAGAADKIHGETLKLSQEMQGYTLREPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMIVKPAEQTPLSALYYAHLAKLAGIPDGVLNVINGFGPTAGAAIASHMDIDKVSFTGSTEVGRLVMQAAATSNLKVVSLELGGKSPLVIFDDADVDTAVNLALLGILYNKGEICVAGSRVYVQEGIYDEFVKKSVEKAKTWVVGDPFDSHVQQGPQVDKVQFEKILSYIKHGKSEGATLLTGGKPCGEKGYYIEPTIFTDVKEDMLVVKDEIFGPVMSLMKFKTVEEAIERANKTRYGLAAGIVTKDLNIANRVSRSIRAGVIWINCYFAFDRDCPFGGFKMSGFGRDSGLNALDKYLHVKSVVTPIYNSPWL* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00019 501 SUPERFAMILY ALDH-like 14 497 IPR016161 GO:0016491
Eupl09g00019 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
Eupl09g00019 501 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 25 287 - -
Eupl09g00019 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Eupl09g00019 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Eupl09g00019 501 FunFam Aldehyde dehydrogenase, putative 463 489 - -
Eupl09g00019 501 FunFam Aldehyde dehydrogenase3 271 460 - -
Eupl09g00019 501 Pfam Aldehyde dehydrogenase family 30 491 IPR015590 GO:0016491
Eupl09g00019 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
Eupl09g00019 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 11 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00019 Eupl-Chr9 1703760 1711312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00019 4 501 Aldehyde Dehydrogenase Gene Family AT3G24503 73.146 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00019 K12355 - nnu:104595225 869.766