Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01376 ATGCCGGAATCCGAGACAGGTACGCCGAACGCGTCGGCTCCGGCGACGCCTGGCACACCCGGTGGGCCACTATTCTCGTCAGTCCGAGTCGACTCGCTATCCTATGATCGAAAGTCGATGCCGCATTGCAAGTGCTTGCCTGTCAACACGTGGTCTGCGAGTCACACGTGTTTCACCGACTTCCCCAGGCCTGATGTCTCTCTCACCCGGAAGGTGGGAGCGGAGTTCGTGGGGACATTCATCCTGATATTTGCAGCAACAGCGGGACCAATTGTGAACCAGAAGTACAATGGGGCGGAGTCACTGATCGGGAACGCAGCGTGTGCAGGGCTGGCGGTGATGATAGTGATACTGTCAACAGGCCACATTTCCGGAGCACACCTCAACCCATCGCTCACGATAGCTTTTGCTGCGCTTCGTCATTTCCCATGGGTTCAGGTACCGGCGTACATTGCAGCACAGGTGTCAGCATCAATATGCGCCTCTTTTGCACTCAAGGGCGTATTCCACCCCTTCATGTCTGGTGGGGTTACTGTCCCATCCGTGAGCACCGGTCAGGCCTTCGCCCTTGAATTCGTTATCACCTTCAATCTCCTCTTTGTCGTCACTGCCGTTGCGACAGACACCCGGGCGGTCGGAGAATTGGCGGGAATAGCTGTTGGGGCAACTGTTATGCTTAACATTCTCGTGGCCGGGCCATCCAGCGGTGGTTCGATGAATCCCGTACGGACTCTAGGCCCTGCCGTGGCAGCAGGTAACTACAAGAAAATCTGGATTTACCTGGTTGCTCCTACACTGGGGGCCATTACAGGGGCAGGTGTCTACACGTCCGTGAAACTCCGAGATGAGGAAGCCGACCCACCACGCCAGGTTAGGAGCTTCCGTCGCTAG 891 0.5679 MPESETGTPNASAPATPGTPGGPLFSSVRVDSLSYDRKSMPHCKCLPVNTWSASHTCFTDFPRPDVSLTRKVGAEFVGTFILIFAATAGPIVNQKYNGAESLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWVQVPAYIAAQVSASICASFALKGVFHPFMSGGVTVPSVSTGQAFALEFVITFNLLFVVTAVATDTRAVGELAGIAVGATVMLNILVAGPSSGGSMNPVRTLGPAVAAGNYKKIWIYLVAPTLGAITGAGVYTSVKLRDEEADPPRQVRSFRR* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01376 296 Gene3D Glycerol uptake facilitator protein. 54 290 IPR023271 -
Eupl08g01376 296 PANTHER AQUAPORIN NIP2-1 40 284 IPR034294 -
Eupl08g01376 296 MobiDBLite consensus disorder prediction 1 15 - -
Eupl08g01376 296 FunFam Aquaporin NIP2-1 58 290 - -
Eupl08g01376 296 CDD MIP 70 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl08g01376 296 PRINTS Major intrinsic protein family signature 258 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl08g01376 296 PRINTS Major intrinsic protein family signature 146 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl08g01376 296 PRINTS Major intrinsic protein family signature 109 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl08g01376 296 PRINTS Major intrinsic protein family signature 221 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl08g01376 296 PRINTS Major intrinsic protein family signature 190 208 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl08g01376 296 PRINTS Major intrinsic protein family signature 70 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl08g01376 296 ProSitePatterns MIP family signature. 127 135 IPR022357 -
Eupl08g01376 296 Pfam Major intrinsic protein 66 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl08g01376 296 SUPERFAMILY Aquaporin-like 67 286 IPR023271 -
Eupl08g01376 296 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01376 Eupl-Chr8 35366275 35373124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01376 24 296 Major Intrinsic Protein MIP AT4G10380 84.420 2.68e-169 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01376 K09874 - csv:101212651 523.857