Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01364 ATGCCCCTTGACGAGACCTTCATGCCGGAGAACCCGCAAGAAGGAGAAACAAATATGCAAGAAAGGCATGACACGACTGTCGTCGTCTACCCCATGCACTCCAATCCACAATCCATTCTACGACTCGCCTTGTACCCGATAACATTGAAGTTTGAAGAAGTGGTGTACAAAGTAAAATTGGAGCAGAAAGGATTTTGCTGGGGTGGTTCATGGAGTTCCAAAGAGAAGACTATATTGAACGGCATAACCGGGATTGTGTGTCCGGGAGAGATCTTGGCGATGCTCGGCCCATCAGGCAGTGGCAAGACCACCCTACTGACTGCCCTCGGCGGCAGGCTGAATGGTAAACTATCAGGCAAGATCAGCTATAACGGGCAGCCCTTCTCCAGCTCCACGAAGCGACGTATAGGATTCGTTCCACAGGACGACGTGCTCTACCCTCACCTGACTGTAACCGAGACCCTTGTCTTCACTGCTCTACTAAGGCTGCCGGACACCTTGACTAAGGAAGAAAAGGTTGAGCACGCAGAGCATGTGATCACTGAATTGGGTCTAACCAGGTGCAGGAACAGCATGATAGGAGGACCACTCTTTAGAGGGATATCAGGTGGTGAGAAGAAGAGGGTGAGCATAGGTCAAGAAATGCTGATCAATCCAAGTCTCTTGTTGCTAGACGAGCCCACTTCAGGTCTGGACTCAACCACGGCTCAGCGGATCCTAACCACGCTTAAACGACTCGCGAGCGGGGGTAGAACCATAGTTACTACCATTCATCAACCATCAAGCAGACTATACCACATGTTTGATAAGGTGGTGTTGATCTCAGAAGGATGCCCCATCTACCATGGACCAGCATCAACTGCCATGGATTACTTCTCCTCCATTGGATTCTCGACATCAGTCACCGTCAACCCGGCTGATCTCTTGCTTGATCTTGCCAATGGGATCCCGCCCGATTCCAAGCAAGTCGCGGATCAAACCGATATTCAGGGCAGCAGCGTAGAACAAGAGCAGAAATTGGTGAGGGAGACTCTCGTATCTGCTTATGACAAGAACATTGCGACAAGGTTGAAGACCGAGCTCTGCAGTTTGGACGTAAACAACTACGGTTATGGATCTACGACCGGCAACATGGCGAAGTACGAGCAATGGGGCACAAGCTGGTGGCAGCAGTTTAAAGTACTGCTGAGGAGAGGGCTGAAGGAGCGCAGGTACGAAGCTTTCAACAGACTAAGGATCTTCCAAGTTATAAGCGTCGCTTTTCTTGCTGGTCTCCTTTGGTGGCACACCCCAACATCCCACATCCAAGATCGCGTCGCACTGCTCTTTTTCTTCTCCATCTTCTGGGGCTTCTTCCCACTCTACAATGCAGTCTTCACGTTTCCCCAAGAACGAGCCATGCTCATCAAGGAACGGTCTTCCGGCATGTACCGCCTCTCCTCCTATTTCCTAGCTAGGACTGCAGGAGACCTGCCAATGGAGCTTGCGCTTCCTACCGCCTTCGTCTTCATTATCTACTGGATGGGTGGTCTCAAGGCTGATCCCACCACCTTCATCCTCACCCTGCTTGTCGTCCTCTACAGCGTCCTTGTCTCTCAGAGCCTAGGTCTCGCATTCGGTGCCATCCTCATGGACGTCAAACAAGCTACCACCTTGGCATCTGTCACCACCCTTGTCTTCCTGATTGCCGGGGGCTACTACGTTCAGCAAATCCCTCCCTTCATCGTCTGGTTGAAATACTTGAGCTACAGCTTCTATTGTTACAAGCTTCTTCTCGGGATCCAGTACACTGAGAATGACTATTATGTGTGTTCTACAAAGGGGAACTTGTGCCGGGTGGTAGATTTTAATGCCGTTAAGTCTGTTGGTCTGAACCACTTGTGGATAGATGTGTGCATCATGGCCCTGATGTTGGTCGGCTATCGGCTAGTTGCTTACCTGGCCTTGCACCGGGTGCAAGTGAGGTAG 1968 0.5091 MPLDETFMPENPQEGETNMQERHDTTVVVYPMHSNPQSILRLALYPITLKFEEVVYKVKLEQKGFCWGGSWSSKEKTILNGITGIVCPGEILAMLGPSGSGKTTLLTALGGRLNGKLSGKISYNGQPFSSSTKRRIGFVPQDDVLYPHLTVTETLVFTALLRLPDTLTKEEKVEHAEHVITELGLTRCRNSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILTTLKRLASGGRTIVTTIHQPSSRLYHMFDKVVLISEGCPIYHGPASTAMDYFSSIGFSTSVTVNPADLLLDLANGIPPDSKQVADQTDIQGSSVEQEQKLVRETLVSAYDKNIATRLKTELCSLDVNNYGYGSTTGNMAKYEQWGTSWWQQFKVLLRRGLKERRYEAFNRLRIFQVISVAFLAGLLWWHTPTSHIQDRVALLFFFSIFWGFFPLYNAVFTFPQERAMLIKERSSGMYRLSSYFLARTAGDLPMELALPTAFVFIIYWMGGLKADPTTFILTLLVVLYSVLVSQSLGLAFGAILMDVKQATTLASVTTLVFLIAGGYYVQQIPPFIVWLKYLSYSFYCYKLLLGIQYTENDYYVCSTKGNLCRVVDFNAVKSVGLNHLWIDVCIMALMLVGYRLVAYLALHRVQVR* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01364 655 Gene3D - 68 295 IPR027417 -
Eupl08g01364 655 MobiDBLite consensus disorder prediction 1 21 - -
Eupl08g01364 655 FunFam ABC transporter G family member 22 66 295 - -
Eupl08g01364 655 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 24 646 - -
Eupl08g01364 655 Pfam ABC-2 type transporter 258 329 IPR043926 GO:0140359
Eupl08g01364 655 ProSitePatterns ABC transporters family signature. 201 215 IPR017871 GO:0005524|GO:0016887
Eupl08g01364 655 CDD ABCG_EPDR 46 283 - -
Eupl08g01364 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 295 IPR027417 -
Eupl08g01364 655 Pfam ABC transporter 80 229 IPR003439 GO:0005524
Eupl08g01364 655 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 49 301 IPR003439 GO:0005524
Eupl08g01364 655 SMART AAA_5 88 278 IPR003593 GO:0016887
Eupl08g01364 655 Pfam ABC-2 type transporter 390 596 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01364 Eupl-Chr8 34745830 34748896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01364 89 286 Calmodulin-binding Proteins AT2G36910 26.341 2.22e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01364 K05681 - nnu:104610288 1087.02