Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01346 ATGAGGAAGAAAGGGTTTCTGAAACTCCTGAAATCCATTTTCTTTCTCATGGACACAGCCAACTTCCCCTCCTCTTCTTCTCCTTCAAACAGCCTTCCATGGCTCTGGGTGATCGAAACCCTCGCCGACTTCAAAGAAGTGGATACAGCTCTTCTCAATGATTTGATAAGTAGGGTTTCAGAGTTGTACGGTGAATCATGGGGCAAAAACGCCAGGGAAAGGCTTGCTCTGAGGCAGTTGGAGGATTTGTTGAGTGGACCCAATGGTAATGCAGATACAAGCAACGTGCCTTTGAACTTCAAACCTCACTGTGAGGTTGGGATCGATATGTCTGAGCCAGCCCAAGAAGTACTCGCTCGTTTTCTTAGTAAGATGGCAGCGTCCAACCTGAGAATGTCTATATCAAAGTTATTGAAACAGGATGTTCGCCAGTTTATTGTCCAGAAAAGGGCTGCTTTGCCCAAATGTGCTCTGCAACAGCTGAAGGATACAATTCTTGAAGGTGGTCATCCATATGCTACATTCTTGAGGGATAGGAGTGGATTGGACAAAGATCAGGAGGAGGATAGAATTGTGGATGGTGGTGATCTCAATGCAGCTATGGAAAGACTTGATCAGAGCACTAATGACTTTGAAATCCAGGCACCAAAAGAGAATTTTATTCATCTAGCCCCTGACAATGGGAACAAACTCTTGCAAGAAGATCCTTGTGGCAAAGATTTAAAATCTATCGGGAGGGAGATGGCCAAACAAAACCAGGTGAAAGGTTTGGATAAAAACAGAATTTGTTTGGATATTGTTGATGATTTAGCCAACAGCCTTAAGCAAGGCGTGAACAACGGTGAATTTCATTCAATATATCAGAACTCAGACACTTTGGCCCTAGAAAATAGAAATGAAATCATACAAGAAGATCCTTCTGATGGTATTTTAATATCTCGTAAGAGAGAAAGGAGTGGCTTCACTAATGAACAGCAGCTGGGATGTTTGGATGTTGGCAAAGTTCACCATCGAGATGCTAAGAAGCTTACTAAGTTTGATGAACTCAAGTCTATGGGACAGAACTCCACTCCTCTGCTTGGACATGAACTTTTACAAGATCCTCCTGGAAGGATTTTATTATCTGCTGAAAGGGAAGTGTGTGGCTTGGCAAAAGAAATCCAAGTGCAAGATCTGCAGAAAAAGGGAATTTGTGTGGATGATGGTAATGATTATGACCATGTTGCCTCAAAGAGGCATAAGCAAAGCACTAATGATGGTTTAATCCAGCATAACCAGTCACACATTCCTTTTAATGAAGAGAAAATAACTATAGAAGCACCTCTGGATGAGCCCTACCAAAATAATTATGTTGGTGAAGCCAAAGATGAGAGTGAGCATCGTAATAAACCAGAAACATCAAGTGGCAATGATGGAAATCTCAATAAAGATCCTTCCTTTGATTTAGATGATGAGATGGCAATTGCTGCAGAGAAGCGTAGTTTCTTGAGTTCGCAAAACACATCCAATGAAGATTCTCTGACAGCAGATTGGACAGAACAAAGTTTTTGTATAAAGTGTGACAAAGGTGGTCCGTTGTTGATTTGTAGTGTCCGTGCTTGCCCATTAGCCGTCCATGAGACCTGCGTGGACTCTTCAGCTAGTATTGACGACACAGGCAACTTCTATTGCCCATTTTGTTCGTACACACGAGCAACTGCTGCATATTGTGAAGCCAAGAAAAAGGTTGCTCTGGTAAAAGAAAAGGCTGCCTTGGCAAGGAATCATTTATCTAAATTTATGTGCATGGTCCAGGCGCACCAACAAAAGCAACCTTCTGAAATAACACCCACAGAAGAACCAAGTCAATCAAGAATGGATGGAGATGCTAATATTCTCAAGGAGATCCATGGTAGTAGGCAGCAGACAGAGAGAATCAATAATCAATCTGTGCATGCAGTGGTGCATCAGCAAGAAGCAGAAGTTGCTGTTGAATTTCTTAGTAGTGTTGCACCCTGTAGAGGAGCACCATTGCCTCCAATCAGTGAGAGAAATGATGTTGCCCTAACCAGAGAAGAAGAACACCCAAAACAAGTCAACCATCAAAATAGAATAGTGTTAGAAGATCAACAGCATCCAGAGCCTTCTTCTGTACATGGTTGTGATGATTTACTTTGGAGTGAAGAGGAGAAAACTGAAATCTGCGAGAAGATACCTGATGTTTCTTTGAGGAAAGAAAGGGGCAAAGCAAAGATGGATGAAGAGCATCAGTCTATATCAGGATGGGAAAGGAATCAAGTAGCAGCTTGTAGAAAGAGAAACACTGCTAATTCACCCCGTAGAGACATAGAGACCGACTCAATCAGTCGAGAACATGCTGATGTAGGAACCGAAAATGCAGATGTACAACAGACTGTTGATACACCACATAAACCTTCCTCTCAACTAGATATCAATGCAGAGGAAATTGCTGAAAATGAAAATGATGATACTGACTCCAGGAAACGCAGAAGGCCTGCTAACCGTCACTCAAACCGAGCATTACCTTCGCGGCGAAAGAAAATCCCTTGGACTGCTGAAGAAGAAGAAATACTAAAGGAAGGAGTGTGCAGACTTGGAAGTACTGATGGGAAAAATGTCCCATGGAAGAAAATATTGGAGTTCGGTTGCCATGTATTTCAGAGAAGTCGAACCACAGTTGACCTCAAGGATAAATGGAGGAATATTTGGACCAGAGGCCCAAGAGCAAGATGA 2733 0.4237 MRKKGFLKLLKSIFFLMDTANFPSSSSPSNSLPWLWVIETLADFKEVDTALLNDLISRVSELYGESWGKNARERLALRQLEDLLSGPNGNADTSNVPLNFKPHCEVGIDMSEPAQEVLARFLSKMAASNLRMSISKLLKQDVRQFIVQKRAALPKCALQQLKDTILEGGHPYATFLRDRSGLDKDQEEDRIVDGGDLNAAMERLDQSTNDFEIQAPKENFIHLAPDNGNKLLQEDPCGKDLKSIGREMAKQNQVKGLDKNRICLDIVDDLANSLKQGVNNGEFHSIYQNSDTLALENRNEIIQEDPSDGILISRKRERSGFTNEQQLGCLDVGKVHHRDAKKLTKFDELKSMGQNSTPLLGHELLQDPPGRILLSAEREVCGLAKEIQVQDLQKKGICVDDGNDYDHVASKRHKQSTNDGLIQHNQSHIPFNEEKITIEAPLDEPYQNNYVGEAKDESEHRNKPETSSGNDGNLNKDPSFDLDDEMAIAAEKRSFLSSQNTSNEDSLTADWTEQSFCIKCDKGGPLLICSVRACPLAVHETCVDSSASIDDTGNFYCPFCSYTRATAAYCEAKKKVALVKEKAALARNHLSKFMCMVQAHQQKQPSEITPTEEPSQSRMDGDANILKEIHGSRQQTERINNQSVHAVVHQQEAEVAVEFLSSVAPCRGAPLPPISERNDVALTREEEHPKQVNHQNRIVLEDQQHPEPSSVHGCDDLLWSEEEKTEICEKIPDVSLRKERGKAKMDEEHQSISGWERNQVAACRKRNTANSPRRDIETDSISREHADVGTENADVQQTVDTPHKPSSQLDINAEEIAENENDDTDSRKRRRPANRHSNRALPSRRKKIPWTAEEEEILKEGVCRLGSTDGKNVPWKKILEFGCHVFQRSRTTVDLKDKWRNIWTRGPRAR* 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01346 910 ProSiteProfiles Zinc finger PHD-type profile. 514 563 IPR019787 -
Eupl08g01346 910 Pfam Myb-like DNA-binding domain 849 901 IPR001005 -
Eupl08g01346 910 SUPERFAMILY Homeodomain-like 844 903 IPR009057 -
Eupl08g01346 910 MobiDBLite consensus disorder prediction 453 480 - -
Eupl08g01346 910 ProSitePatterns Zinc finger PHD-type signature. 517 560 IPR019786 -
Eupl08g01346 910 SUPERFAMILY FYVE/PHD zinc finger 505 570 IPR011011 -
Eupl08g01346 910 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 33 905 - -
Eupl08g01346 910 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 503 616 IPR013083 -
Eupl08g01346 910 MobiDBLite consensus disorder prediction 768 790 - -
Eupl08g01346 910 MobiDBLite consensus disorder prediction 738 847 - -
Eupl08g01346 910 SMART sant 846 905 IPR001005 -
Eupl08g01346 910 MobiDBLite consensus disorder prediction 791 814 - -
Eupl08g01346 910 Gene3D - 841 904 - -
Eupl08g01346 910 SMART PHD_3 516 561 IPR001965 -
Eupl08g01346 910 CDD SANT_TRF 848 902 - -
Eupl08g01346 910 ProSiteProfiles Myb-like domain profile. 842 903 IPR001005 -
Eupl08g01346 910 MobiDBLite consensus disorder prediction 738 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01346 Eupl-Chr8 34430263 34436239 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01346 847 902 Single Myb Histone (SMH) Gene Family AT3G49850 49.123 1.83e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl08g01346 Myb_DNA-binding 9.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01346 - - nnu:104603935 473.781