Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01329 ATGAACAACAACGACGTCAAACAAGATCTGGACCCTCAGAGCGACCATAGCTCCGACCACTTCACCCAGCAGCCTCAACCGCAGCGCCGCCCCCGTGGCTTCGCTGCCAGAGCTGCCGCCGCTGCTGCGATGGGAGTTGTTAGCAGCGGAGGCAAAGGGAAGAAGGAGAGGGAGCGAGAAAAGGAACGAACGAAGCTCAGGGAGCGCCACCGTCGCGCAATAACCAGTCGCATGCTCGCCGGACTCCGACAGTACGGAAACTTCACCCTACCCGCCCGTGCCGACATGAACGATGTCCTTGCCGCCCTCGCCCGAGAAGCCGGTTGGACCGTTGAGCCCGATGGCACTACCTATCGCCCCTCCCCTCCTCCCCCTCCTCCTCCTTCCCAAATGGCACCATATACTGTTAGGTCTATTGAAAGCCCCCTGTCTACTACATCTTTGAAACATTGTGCCATTAAAGCATCATTAGACTGTCAGCCAGCTGTTCTCAGGATCGATGAGAGTTTGTCACCGGCATCTCTCGATTCTGTTGTTGTTGCAGAGAGGGATGCGAAGACTGAGAAATATGCAAGTGCCAGTCCCATCAACTCACCAGAGTGTTTAGAGGATGATCAGCTTATGCAGGATGTTCGTCCTGGGGAGCATGAGAATGATTTTACAGGAACTCCATTTATTCCTATTTATGTGACACTCACTACTGGTGTTATCAACAATTTCTGCCAATTGGTTGATCCAGAAGGCATTAGACAGGAGTTGAGACATCTAAAATCTTTACATGTAGATGGAGTGGTTGTAGATTGTTGGTGGGGTATTGTCGAAGGATGGAGCCCACAGAAATACCTATGGTCTGGATATAGAGAACTTTTTGACATCATCCGTGAGTTCAAGCTGAAATTACAGGTCGTAATGGCATTTCATGAGTGTGGAGGAAATGGATCTGGTGATATACCAGTGTCCCTCCCCAAATGGGTTTTGGAGATTGGAAAAGATAATCAAGATATATTTTTCACAGATCGTGAAGGACGGAGAAATACCGAATCTCTATCTTGGGGCATCGACAAAGAACGAATACTAAAAGGAAGAACTGGTATTGAGGTTTATTTTGACTTCATGAGAAGCTTCCGGATGGAATTTGATGACTTATTTGCCGAGGGCCTTATTTCGGCTGTCGAAATTGGACTGGGTGCTTCTGGGGAGCTAAAGTATCCTTCATTCTCAGAAAGGATGGGATGGAGATACCCTGGTATCGGTGAGTTTCAGTGCTACGACAAATATTTACAGCAGAGTCTACGAAAAGCAGCAAAATTGCGTGGACACTCGTTTTGGGCTAGGGGACCTGATAATGCTGGTCAATATAATTCTAGACCGCATGACACTGGATTCTTTTGTGATCGAGGTGATTATGACAGTTACTATGGGCGTTTTTTCCTCCATTGGTATGCGCAGACCCTAATAGACCATGCCGATAATGTACTGTCTCTTGCGACCCTTGCATTTGAGGAGACGCAGATAATTGTGAAGATTCCTGCAGTTTATTGGTGGTACAAGACCACCAGTCATGCAGCGGAGCTCACGGCAGGGTTCTATAATCCTACAAATCAGGATGGCTATTCTCCAGTTTTCGAGGTTCTTAAGAAGCACTCCGTGACGTTGAAGTTTGTCTACTCAGGGTTGCAGTTCTCTGCTCGGGAAATCGATGAAGCTTTAGCTGATCCAGAAGGTTTGAGTTGGCAGGTTCTAAATTCAGCCTGGGATCGTGGATTAACCATAGCTGGTCAGAACGCTTTGCCATGTTATGATAGAGAAGGATATGCGAGAATCCTGGAGACTGCAAAGCCAAGGAATGATCCTGATCGTCGCCACCTGTCCTTCTTTGCATACCAACAACCATCTCCATTTATGCAGAGAGAACACTGCTTCTCAGAGTTGGATTTATTCATCAAATGCATGCATGGGGAAATTACAGGTGATATGCAGGTCTGA 1986 0.4758 MNNNDVKQDLDPQSDHSSDHFTQQPQPQRRPRGFAARAAAAAAMGVVSSGGKGKKEREREKERTKLRERHRRAITSRMLAGLRQYGNFTLPARADMNDVLAALAREAGWTVEPDGTTYRPSPPPPPPPSQMAPYTVRSIESPLSTTSLKHCAIKASLDCQPAVLRIDESLSPASLDSVVVAERDAKTEKYASASPINSPECLEDDQLMQDVRPGEHENDFTGTPFIPIYVTLTTGVINNFCQLVDPEGIRQELRHLKSLHVDGVVVDCWWGIVEGWSPQKYLWSGYRELFDIIREFKLKLQVVMAFHECGGNGSGDIPVSLPKWVLEIGKDNQDIFFTDREGRRNTESLSWGIDKERILKGRTGIEVYFDFMRSFRMEFDDLFAEGLISAVEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQQSLRKAAKLRGHSFWARGPDNAGQYNSRPHDTGFFCDRGDYDSYYGRFFLHWYAQTLIDHADNVLSLATLAFEETQIIVKIPAVYWWYKTTSHAAELTAGFYNPTNQDGYSPVFEVLKKHSVTLKFVYSGLQFSAREIDEALADPEGLSWQVLNSAWDRGLTIAGQNALPCYDREGYARILETAKPRNDPDRRHLSFFAYQQPSPFMQREHCFSELDLFIKCMHGEITGDMQV* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01329 661 MobiDBLite consensus disorder prediction 1 69 - -
Eupl08g01329 661 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 503 519 IPR001554 GO:0000272|GO:0016161
Eupl08g01329 661 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 303 324 IPR001554 GO:0000272|GO:0016161
Eupl08g01329 661 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 469 488 IPR001554 GO:0000272|GO:0016161
Eupl08g01329 661 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 281 299 IPR001554 GO:0000272|GO:0016161
Eupl08g01329 661 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 260 274 IPR001554 GO:0000272|GO:0016161
Eupl08g01329 661 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 520 531 IPR001554 GO:0000272|GO:0016161
Eupl08g01329 661 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 538 561 IPR001554 GO:0000272|GO:0016161
Eupl08g01329 661 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 576 598 IPR001554 GO:0000272|GO:0016161
Eupl08g01329 661 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 396 418 IPR001554 GO:0000272|GO:0016161
Eupl08g01329 661 Pfam Glycosyl hydrolase family 14 246 617 IPR001554 GO:0000272|GO:0016161
Eupl08g01329 661 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 159 654 IPR001554 GO:0000272|GO:0016161
Eupl08g01329 661 SUPERFAMILY (Trans)glycosidases 221 655 IPR017853 -
Eupl08g01329 661 MobiDBLite consensus disorder prediction 111 130 - -
Eupl08g01329 661 MobiDBLite consensus disorder prediction 51 69 - -
Eupl08g01329 661 Pfam BES1/BZR1 plant transcription factor, N-terminal 51 198 IPR008540 -
Eupl08g01329 661 Gene3D Glycosidases 216 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01329 Eupl-Chr8 34219911 34235388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01329 64 655 Glycoside Hydrolase AT5G45300 69.983 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Eupl08g01329 Glyco_hydro_14 2.1e-86 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01329 K01177 - vvi:100254478 1080.47