Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01327 ATGGATGAAGGCAGTACTAGCAAGGAAGACGAATCTCGTCTTGGGGAACACTTGTTGAAGTCTCCGTGGGTTCCGAGACGGCTAGCTTTCTCTTCTTATTCTCCGCCACCGGCAGGAGGAACTGCCCAGAAATCCAGTACTTTGCGCATTATCGTAAGAAGACCGCTGGTTGTGAGATTAACCAAGGACATAGTTGAGACGTACCAAACATGTAACCCAGATTTCAAGTATTCTGAAGCATTGAATCCAAAGCGGTTCCTTACAAGCCCATCAGTCGGAGTGCTCAATGATGGCTATGATAATGCAAACTCAGATCTTATCTTGTCTGTGAACTTTGTCTTGGTTAATGTAGACTTGCCACGAAGGTATGTTGTCAAAGATGTTCTTGGCCATGGGACTTTCGGACAGGTTGTTAAGTGCTGGGTTTCAGAAACTAATAGTTATGTTGCTGTTAAGATCATTAAAAACCAACCTGCATACTACCAGCAGGCACTAGTTGAAGTCTCTATTCTGACGACGTTAAATAAGAAGTTCGATCCTGAGGATAAGCATCACATAGTTCGTATCCTTGATTACTTTGTATACCAACGTCATCTGTGCATTTCCTTTGAACTGCTTGACACAAATCTGTATGAGCTCATCAAGATGAACCAATTTAGAGGCTTATCGCTGAGCATTGTCCAAGTGTTCTCAAAACAGATCTTGCGTGCATTGGTTCTAATGAAAGATGCTGGTATCATTCACTGTGATCTGAAGCCAGAAAACATCTTCTATGTACGAGCTTGTATGGAGGATCGGACAGTTTACTCCTACATTCAGAGCCGTTACTACAGGTCTCCAGAAGTTCTTCTTGGGTATCAATACACTACAGCTATCGATATGTGGTCTTTTGGGTGCATTGTTGCGGAGTTGTTCTTAGGGCTGCCACTATTTCCAGGAGCGTCGGAATTTGATCTTCTTAGGCGGATGATAGAAATACTTGGAGGACAACCCCCTGATCATGTACTAAAGGAAGCAAAAAATACAAATAAGTTCTTTAAGCGCGTCGGGAGTGTCCACTGCTTAGAGGGCAATGAAGCTTACATGGGTGGCAGAAATGCTTACCAAACATTAACTGAAGAGGAATATGAATCTAGGGAGTTGAAAAAACCATTAATAGGGAAAGAGTATTTCAATCGTATGAAGCTCGAGGAAATTGTTACAAGCTACCCTTATCGGAGAAACTTACCTCCTGAAGAAATCTCTAGAGAAAATCTAACCCGCTTAGCAATGATTGATTTCTTGAGGGGACTCATTGAGTTTGATCCAGCGAAGCGGTGGTCACCGTTGCAGGCTTCAAAACATCCTTTTGTGACCGGGGAACCCTTTACATGCCCTTATAAACCTTCCCCAGAGACCCCTCGCATGCTTGTTGCTCAAAATGTTAAGGTGGACCACCACCCAGGTGGAGGGCACTGGTTTGCTGCTGGTCTCTCTCCCCAGGTTTCAAGCATTAACAGGGGTCCTCCACAGAATAGCCCACATTTTCAGGTGGCCCCGTTCTCTTATGCCAGTAGTTATGGCAGTTTGGGAAGCCATGGAAGCCATACCGATGGTGCTGGGCTTAGTAGCAGCTATGGAAGCTATGGGGATGATAGTTCTATGTATGCATATTATTCGCCTGTCGGTCCATCTGGTTTGAACATCCATGCACAGGGTGGAGTATCAATCCTTGGAGCCAGTCCTGATGCTAGGAGGAGGAGTTCTCAACTCTCTCATGGAAATGGACTTGGTGTTAGTCCATCTGCAGGAAATTTTGGGCCAATGTCCCTAGGTGCTAGCCCCTCACAATTTACTCCTCCTGGCTCCCATATACAGGTTTCAGCCGGTTCTCCTGGTAAGTATGGCCCAACTTCTCCAGCAAGAGGCAGTGGTGTTCATGGGTCGCCATTAGGCAAGGTGGCTGCTGTTAGCCAGTTCAACAGAAGAAGAAGTTGGGGACATCCTGGAACTTTCTCCATGCAACCTCAAGAGAATGCATCATCTCAACACTGGCAAGGGCATCACACCGATGGTGCCAGCTGTAGTCATCCCGAGGGGAACTCTCGAGGATATGGTGGTTCTCCTCGGAATGTGCAATCAACTTCTAATGTGCCAAGTCGGAGGCAGCAAAGAGGAAGCAATCGACTGACTTCTGGGTTTTCTTCAACCACAAGTCAGAACACATCAGGATCCTTTGCACTTAGTTCCAATATGCCTCTCCCTCCTACCTCAGAAGCTGCTTACGACAAGCCTGAAAGCAGTTCAATGCCCGATCCTGGAGATTGGGACCCCAATTATAGTGATGAACTTCTTTTGGAAGATGATGGTTCTGATATGAGCTCTGTAGCCTCTGAGTTCACCAATGGGATGCGCATTAGTCATGCTTTGGATTCTACAGTTCCAACGGCTGGAGTTGGAAGATTAAACCGCACCTGTTACCAGACACAGACAAGCTCACATTTATCCAACCAAAGAACAAATGGTCCAGTTCAAGCATATTCACATGTAGAGGTTGGCAGCCCGCCTTCGGCACATGATATGCATGCTGGATATGCTCGTCCCATGTCAAAGCCTTTGCATTTCATGCCTCATTTCTCACCAAGTTCTCCTAGCCGTTTCGGACAGCAACCTGTTCAGCGGTCCAACCATGGGCAATCAACATTTGTTCGCGGTGGTGAGTGGAATCATCCCAAGGTTCAGCCCCCTCCGCCCAACTGTAACACTGTGGGTCCACCTTCTCCTGGCAATAGCACATTTGCCAATGGCTCGTCATGGGGACGAAGGGCCGGACATCCCATCACCACCATTCCACCAACGTCCCATGCAAGAAAGGACTATGGAAGGATTGCCTGA 2874 0.4673 MDEGSTSKEDESRLGEHLLKSPWVPRRLAFSSYSPPPAGGTAQKSSTLRIIVRRPLVVRLTKDIVETYQTCNPDFKYSEALNPKRFLTSPSVGVLNDGYDNANSDLILSVNFVLVNVDLPRRYVVKDVLGHGTFGQVVKCWVSETNSYVAVKIIKNQPAYYQQALVEVSILTTLNKKFDPEDKHHIVRILDYFVYQRHLCISFELLDTNLYELIKMNQFRGLSLSIVQVFSKQILRALVLMKDAGIIHCDLKPENIFYVRACMEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIEILGGQPPDHVLKEAKNTNKFFKRVGSVHCLEGNEAYMGGRNAYQTLTEEEYESRELKKPLIGKEYFNRMKLEEIVTSYPYRRNLPPEEISRENLTRLAMIDFLRGLIEFDPAKRWSPLQASKHPFVTGEPFTCPYKPSPETPRMLVAQNVKVDHHPGGGHWFAAGLSPQVSSINRGPPQNSPHFQVAPFSYASSYGSLGSHGSHTDGAGLSSSYGSYGDDSSMYAYYSPVGPSGLNIHAQGGVSILGASPDARRRSSQLSHGNGLGVSPSAGNFGPMSLGASPSQFTPPGSHIQVSAGSPGKYGPTSPARGSGVHGSPLGKVAAVSQFNRRRSWGHPGTFSMQPQENASSQHWQGHHTDGASCSHPEGNSRGYGGSPRNVQSTSNVPSRRQQRGSNRLTSGFSSTTSQNTSGSFALSSNMPLPPTSEAAYDKPESSSMPDPGDWDPNYSDELLLEDDGSDMSSVASEFTNGMRISHALDSTVPTAGVGRLNRTCYQTQTSSHLSNQRTNGPVQAYSHVEVGSPPSAHDMHAGYARPMSKPLHFMPHFSPSSPSRFGQQPVQRSNHGQSTFVRGGEWNHPKVQPPPPNCNTVGPPSPGNSTFANGSSWGRRAGHPITTIPPTSHARKDYGRIA* 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01327 957 MobiDBLite consensus disorder prediction 920 957 - -
Eupl08g01327 957 MobiDBLite consensus disorder prediction 600 619 - -
Eupl08g01327 957 SMART serkin_6 123 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g01327 957 CDD PKc_YAK1 123 451 - -
Eupl08g01327 957 Pfam Protein kinase domain 123 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g01327 957 MobiDBLite consensus disorder prediction 699 749 - -
Eupl08g01327 957 ProSiteProfiles Protein kinase domain profile. 123 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g01327 957 MobiDBLite consensus disorder prediction 573 644 - -
Eupl08g01327 957 PANTHER DUAL SPECIFICITY PROTEIN KINASE 82 454 - -
Eupl08g01327 957 MobiDBLite consensus disorder prediction 576 592 - -
Eupl08g01327 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Eupl08g01327 957 SUPERFAMILY Protein kinase-like (PK-like) 117 470 IPR011009 -
Eupl08g01327 957 Gene3D Transferase(Phosphotransferase) domain 1 203 452 - -
Eupl08g01327 957 MobiDBLite consensus disorder prediction 658 683 - -
Eupl08g01327 957 Gene3D Phosphorylase Kinase; domain 1 88 202 - -
Eupl08g01327 957 ProSitePatterns Protein kinases ATP-binding region signature. 129 152 IPR017441 GO:0005524
Eupl08g01327 957 FunFam Dual specificity tyrosine-phosphorylation-regulated kinase 1A 86 202 - -
Eupl08g01327 957 MobiDBLite consensus disorder prediction 658 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01327 Eupl-Chr8 34194742 34210719 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01327 129 328 MAP Kinase Gene Family AT2G43790 34.802 1.15e-26 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Eupl08g01327 Pkinase 6.3e-40 CL0016