Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01325 ATGATCGTTGCAAGATCATGTGGATGGTTAAATGTTCTAGTCTGTCTACTGATCGCGTTAAAAGCGGATGGGTTCTATGTGGGGATAACTTATGTTCAAAATGCTGTCGCAAAAGGAGCGGTTTGCTTGGATGGGAGTCCACCAGCTTACCATATGGATAAAGGATTTGGCACTGGGATTAATAATTGGCTGGTCCATATTGAGGGGGGAGGATGGTGCAATAATGTCACTACTTGCCTTGAACGCAAGAGCACCCGTTTAGGTTCCTCTACCCAAATGGTGAAGCAAATTGCTTTCTCTGGGATTCTGAGCAACAAGGATAAATTTAACCCAGACTTCTATAATTGGAACAAAATCAAGGTTCGGTACTGCGATGGAGCATCATTTACCGGAGACGTTGAAGCAGTAAATCCAGCTACCAACCTTCACTTCAGAGGAGCAAGGGTTTGGCTTGCTGTTATCGAGGACCTACTAGCAAAAGGGATGAACAAGGCTGAAAATGCTCTTCTTTCTGGCTGTTCAGCTGGTGGGTTGACATCGATTCTCCACTGTGATAGCTTCCGCAGTCTCCTACCCATGGGTACCAAAGTAAAATGCCTTTCAGATGCTGGTTATTTTATCAATACGAAGGATGTTGCTGGAACAGCACACATACAAGCTTTCTATAATGATGTTGTAACAACACATGGATCGGCAAAGAATTTGCCATCGTCTTGCACTTCAGGAATCGACCCAAGTTTGTGTTTTTTCCCACAATACATGGCGCAAATGATCCGCACACCACTTTTTATATTAAATGCAGCCTATGATTCGTGGCAGGTAAAGAACATTTTGGCACCGGGTGTTGCTGATCCCCACGGCACTTGGCACTCCTGCAAGCTTGATATAAATAACTGTTCTCCCACTCAAATCCAAACCATGCAAGGTTTTAGGTCGGAGTTTCTACTTGCATTGAGACAACTGGGGAGCTCTTCGGCAAGAGGCATGTTCATTAACTCGTGTTATGCTCACTGCCAATCAGAGATGCAGGAGACATGGCTAAGGGCCGACTCCCCCGTATTGGACAAGATATCAATTGCAAAGGCAGTTGGAGATTGGTTTTATGACCGGAGTCCTTTCCAGAAGATTGATTGTCCATACCCTTGCGACTCGTCTTGCCACAACCGCGTCTTCGATCCACAAGAACATCCCGAAACATAA 1200 0.4517 MIVARSCGWLNVLVCLLIALKADGFYVGITYVQNAVAKGAVCLDGSPPAYHMDKGFGTGINNWLVHIEGGGWCNNVTTCLERKSTRLGSSTQMVKQIAFSGILSNKDKFNPDFYNWNKIKVRYCDGASFTGDVEAVNPATNLHFRGARVWLAVIEDLLAKGMNKAENALLSGCSAGGLTSILHCDSFRSLLPMGTKVKCLSDAGYFINTKDVAGTAHIQAFYNDVVTTHGSAKNLPSSCTSGIDPSLCFFPQYMAQMIRTPLFILNAAYDSWQVKNILAPGVADPHGTWHSCKLDINNCSPTQIQTMQGFRSEFLLALRQLGSSSARGMFINSCYAHCQSEMQETWLRADSPVLDKISIAKAVGDWFYDRSPFQKIDCPYPCDSSCHNRVFDPQEHPET* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01325 399 PANTHER NOTUM-RELATED 16 388 IPR004963 GO:0016787
Eupl08g01325 399 Pfam Pectinacetylesterase 21 372 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01325 Eupl-Chr8 34162948 34167211 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01325 9 397 Carbohydrate Esterase AT4G19420 64.858 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01325 K19882 - nnu:104588061 712.99