Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01299 ATGATGTTGGGGGGAAACGGAGAGAACGAAGCCCTAAGCCGGATGAATATGATGTCAGCTTCTCTACCGCTGCAACTGAATCCGATGGCGATCTCCGTCGAGATGCCGTCGACGATGAGGAAGGACGACAGAGTTCCTCAATGGAGCCATCAAGAAACGAGAGATTTCATCTCGATTCGCGCTGAATTGGAGAGAGATTTCACGGTTGCAAAGCGAAATAAGACTCTTTGGGAGATCGTCGCAGCGAAGATGAAGGAGAGAGGGTACAGGCGGACCCCTGATCAGTGTAAGTGCAAGTGGAAGAACCTCGTCAATCGATATAAGGGGAAAGAGACGTCGGATCCAGAGAATGGTCGGCAATGCCCGTTCTTCGAAGAACTTCACGCGGTTTTCAACGAGCGAGCTAAGAATATGCATCGTCTACTCCTCGAATCAGAGGCTGGAGGCGTACAGGCAAAGAAGAAGGTAAAGAGGCTAAGCGGAGATCGATCCTCTGATGACTTCTCAGAAGACGACGACGATGATGAAGACGACAGCGAGGAAGAGCGCCTCACAAGGAGCAACCGAAAAAGAAAGGCCGATAGAGACCGGCAACAACGGATCACCACCTCAGATAAACCATCGATGAAATCATCAAATACTAATACTGGGATTCAAGAAATGCTTCAGGAATTCTTCCATCAGCAGCAGAGAATGGAAATGCAGTGGAGGGAGATGATGGATAGACGGGCACAAGAAAGGCGATTGTTCGAGCAAGAATGGCGCCAATCCATGGAGAAAATGGAGAGGGAGAGGCTGCTTGTCGAGCAAGCGTGGCGAGAGAGGGAGGAACAGAGAAGGAGGAGAGAAGAGAACCGAGCCGAAAAGAGGGATGCCCTCTTAACTACTCTCTTGAACAAACTCATTCACGAAGATCATCTTTGA 924 0.4968 MMLGGNGENEALSRMNMMSASLPLQLNPMAISVEMPSTMRKDDRVPQWSHQETRDFISIRAELERDFTVAKRNKTLWEIVAAKMKERGYRRTPDQCKCKWKNLVNRYKGKETSDPENGRQCPFFEELHAVFNERAKNMHRLLLESEAGGVQAKKKVKRLSGDRSSDDFSEDDDDDEDDSEEERLTRSNRKRKADRDRQQRITTSDKPSMKSSNTNTGIQEMLQEFFHQQQRMEMQWREMMDRRAQERRLFEQEWRQSMEKMERERLLVEQAWREREEQRRRREENRAEKRDALLTTLLNKLIHEDHL* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01299 307 MobiDBLite consensus disorder prediction 152 214 - -
Eupl08g01299 307 CDD GT1 46 111 - -
Eupl08g01299 307 ProSiteProfiles Myb-like domain profile. 40 104 IPR001005 -
Eupl08g01299 307 MobiDBLite consensus disorder prediction 182 203 - -
Eupl08g01299 307 MobiDBLite consensus disorder prediction 166 181 - -
Eupl08g01299 307 Pfam Myb/SANT-like DNA-binding domain 47 129 IPR044822 -
Eupl08g01299 307 PANTHER FI21293P1 39 302 - -
Eupl08g01299 307 Gene3D - 48 109 - -
Eupl08g01299 307 FunFam Zinc finger and SCAN domain-containing 20 48 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01299 Eupl-Chr8 33810302 33811933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01299 25 307 Trihelix Transcription Factor Family AT2G38250 40.141 8.35e-44 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl08g01299 Myb_DNA-bind_4 9.8e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01299 - - nnu:104611557 413.69