Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01279 ATGTTTAGTACTGGATTTTCGGGGATTCCTGCTTTAGACACCATTGTTAGTTTTCTTTGTTTCTCGATGCTTAATGTAGATTTTTTTGTATTATTTGATCTGGGTTTCTTTTACCGACGCCATAAAAGACAGATTAGAGTTTATTTCAGGGCAAAAAGATTGGATTTTTATCCGACTTCACCATGTTTCTTCTTGAATCAATTTGTTATCTGGTTTTGTTTAATTCTCCATGTTTTATGGTGGAAGCGATATCATTTAAGAGAGTGTTTTGTTGCAGTAGATTATTGTTCCTTTTATGGGAAGAAAGCGGACCCGGAGCCTGGAAGGTGCAGGAGGACCGACGGGAAGAAGTGGAGGTGCTCCAAAGACGCATACCCGGACTCCAAGTATTGCGAGCGGCACATGCACCGCGGCCGCAACCGTTCAAGAAAGCCTGTGGAAACGCAAACTATCTCTCAGTCGTCGTCGACTGTGACATCACTCACCACCCCCACCGGGAGCAGCGGTGGTGGCAGTGGAAGCTTCCAAAACCTGCCCTTGCACGCCATTCCTAACCCTCAGGGCCTATGTGCAGGAAGCAACCCATCCCAATTGCAGATGGAGTCTGTACCTTACGGAATAGGAGGCAAAGATTACAGGTATATTCATGGAATGAAACCAGTGACAGATGAGCATAGTTTCTTCTCAGAAGCTTCTGGGAGTGCAAGGGGTATTGGGATGGACTCTTCTCTAGAGAGCACGTGGCGTCTGATGCCATCTCGAGTGTCCTCATTTCCTCCATCAAAATCGAGAAATGGCTCCATTTTGCAGAGCGATTACCCCCAGATGCACACGCTGCAAGATCTCGGGCAGGTGACCATTGCCTCTGCACTGTCAAAACAGCAACAGCAGCACTGCTTCTTTGGCGGCGAGTTTGGTTCAGCAGAACCTGTGAAGCAGGAGGGACAGTCACTTCGACCTTTCTTTGATGAGTGGCCCAAGACCAGAGACTCATGGTCTGATCTTGACGATGAGAGATCCAACCGGACTTCATTCTCCACGACTCAGCTCTCAATTTCCATACCGATGGCTTCCTCTGACTTCTCTGCAACAAGCTCTCGATCCCCCAATGGTGAGTGTGTTTCCGATCTAGACCAAGCTTTCCCTTCTCATCATGTAATCTGA 1164 0.4759 MFSTGFSGIPALDTIVSFLCFSMLNVDFFVLFDLGFFYRRHKRQIRVYFRAKRLDFYPTSPCFFLNQFVIWFCLILHVLWWKRYHLRECFVAVDYCSFYGKKADPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVETQTISQSSSTVTSLTTPTGSSGGGSGSFQNLPLHAIPNPQGLCAGSNPSQLQMESVPYGIGGKDYRYIHGMKPVTDEHSFFSEASGSARGIGMDSSLESTWRLMPSRVSSFPPSKSRNGSILQSDYPQMHTLQDLGQVTIASALSKQQQQHCFFGGEFGSAEPVKQEGQSLRPFFDEWPKTRDSWSDLDDERSNRTSFSTTQLSISIPMASSDFSATSSRSPNGECVSDLDQAFPSHHVI* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01279 387 PANTHER GROWTH-REGULATING FACTOR 5 83 360 IPR031137 GO:0005634|GO:0006351|GO:0032502
Eupl08g01279 387 ProSiteProfiles WRC domain profile. 104 148 IPR014977 -
Eupl08g01279 387 MobiDBLite consensus disorder prediction 145 178 - -
Eupl08g01279 387 MobiDBLite consensus disorder prediction 359 373 - -
Eupl08g01279 387 MobiDBLite consensus disorder prediction 136 178 - -
Eupl08g01279 387 Pfam WRC 105 147 IPR014977 -
Eupl08g01279 387 MobiDBLite consensus disorder prediction 359 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01279 Eupl-Chr8 33505182 33509677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01279 81 220 GRF Transcription Factor Family AT4G37740 42.958 1.77e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01279 - - nnu:104596390 447.588