Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01270 ATGGATCGGTACAAGATAATTAAGGAAGTTGGTGATGGAACCTTCGGGAGTGTCTGGCGAGCTATAAATAAGCAGACTGGTGAAGTTGTTGCAATCAAAAAAATGAAAAGAAAGTATTATTCTTGGGAAGAGTGCATTAATCTTAGGGAAGTGAAGTCTTTGCGAAAGATGAACCATCCCAATATCGTGAAGCTCAAGGAAGTCATCAGAGAACATGACATCTTGTATTTCGTGTTTGAATACATGGAATTCAACCTGTACCAGCTTATGAAAGATAGGGGAAAACTTTTTTCAGAGAATGAAGTTCGGAATTGGTGCTTTCAAGTATTTCAAGCTCTTGTTTACATGCACCAGCGAGGATATTTTCATCGCGACCTTAAGCCGGAGAACTTACTGGTTACAAAAGACATAATTAAAATTGCTGATTTTGGTCTTGCTCGAGAAATCTGCTCTCAGCCACCATATACGGAATATGTCTCAACTCGCTGGTATCGAGCCCCTGAAGTTCTGCTCCAATCATCCACGTATAATTCTGCTGTTGATATGTGGGCGATGGGTGCTATCATGGCTGAGTTGTTTACCCTCCGTCCTCTTTTTCCTGGTTCAAGCGAAGCAGATGAGATATACAAAATATGCAGTGTGATAGGCAGTCCTAATCATAACTCATGGGGTGAGGGGCTTCAACTCGCGAATGCGATCAAGTACCAATTTCCGCAGTTTGCAAGTGTCCATCTTTCTGTACTGATACCATCAGCAAGTGAGGATGCAATCAGTCTAATCACATCGCTTTGCTCTTGGGATCCCAGTAAGAGGCCAACAGCTGCAGAGGCCCTTCAGCATCCTTTCTTCCAGACCTGCTTTTACGTTCCACCGTCCCTTCGCTCGAGAGCTACACTCCCTAGAACACCTCCGACTGTTGGAACAAGATCAGCTTTGGAACAAAAGAGTGCTAGAAGACATTCCGGAACTTTATCTAATATGAAGCCCACAAGCAACTTCTCTTCTGCAAAGATACATGCTTCTTTAAGTCCAGGTGTGCAGAGGAAGCTGGAAATGGATTACCGGGAGGTGAATAAGAATGACAAATCTGTGAAGAGTTGTGCCAAGCAACCAAGATATCGTCCACCTGCAAGGAGCACCCCAACGTCTGTTTCGGGCAGGGGTGCACGTGGAATTGTTTCTGACACGGCCGATAAATTGGCGCAGATGACGGTTAGCTCTGGCAGGGTGGTGCCAGTGAGGCAACAGGCGGCAGCACCACCACCACCTATGAAGGCCGGAGGGTGGCATGGCAACTCGGACATATTCCTTGGACGATCACACGAGATTTCATCTGGCAGAAGTTATTCAAGGAAGGTTGTGGGTTGA 1368 0.4569 MDRYKIIKEVGDGTFGSVWRAINKQTGEVVAIKKMKRKYYSWEECINLREVKSLRKMNHPNIVKLKEVIREHDILYFVFEYMEFNLYQLMKDRGKLFSENEVRNWCFQVFQALVYMHQRGYFHRDLKPENLLVTKDIIKIADFGLAREICSQPPYTEYVSTRWYRAPEVLLQSSTYNSAVDMWAMGAIMAELFTLRPLFPGSSEADEIYKICSVIGSPNHNSWGEGLQLANAIKYQFPQFASVHLSVLIPSASEDAISLITSLCSWDPSKRPTAAEALQHPFFQTCFYVPPSLRSRATLPRTPPTVGTRSALEQKSARRHSGTLSNMKPTSNFSSAKIHASLSPGVQRKLEMDYREVNKNDKSVKSCAKQPRYRPPARSTPTSVSGRGARGIVSDTADKLAQMTVSSGRVVPVRQQAAAPPPPMKAGGWHGNSDIFLGRSHEISSGRSYSRKVVG* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01270 455 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Eupl08g01270 455 MobiDBLite consensus disorder prediction 297 340 - -
Eupl08g01270 455 FunFam cyclin-dependent kinase F-4-like 1 83 - -
Eupl08g01270 455 Gene3D Transferase(Phosphotransferase) domain 1 84 290 - -
Eupl08g01270 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Eupl08g01270 455 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g01270 455 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g01270 455 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Eupl08g01270 455 FunFam serine/threonine-protein kinase MAK isoform X1 84 293 - -
Eupl08g01270 455 MobiDBLite consensus disorder prediction 358 390 - -
Eupl08g01270 455 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g01270 455 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Eupl08g01270 455 CDD STKc_MAK_like 4 283 - -
Eupl08g01270 455 MobiDBLite consensus disorder prediction 298 340 - -
Eupl08g01270 455 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01270 Eupl-Chr8 33389646 33398111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01270 1 290 Core Cell Cycle Gene Families AT3G48750 36.577 2.58e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Eupl08g01270 Pkinase 2.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01270 K08829 - nnu:104612888 773.467