Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01269 ATGCAGAACCCAGATAAGGAAAAACCGACTGTAGATCAAGTGGTTCTTCTCATGGACCAGCAATCCCTAAAACCCAAACAATCTTTCCAAACAGAGCTCATCAACGACCCAGTAGTCACCGGTGGAGAAAAGCCTCCGAACCCATCACGAACCATAACCTTCCGTCGCACCAACTTACCCAAACCCAAAGCTCGATTTGTCGAGAGCCACTACCCACCCCCCTCAAAATCAATCCTTCAATCAGACGATCTACTCGAACCCTTCAAATCCCAAGAAAACAACTACCCATCAACCGATGAAGACGACGACGACGATTTCTCCATGGACGAAGGCGAAGAAGACGCAGCACGCGAAATCTACTTAAAGAAGAGGAGAAAAATTCGTTGGAGATCTTTAATCGAATGGATCTCGTTTTGCATCATCATGGCCATTATGATCTGTAGTCTCACAGTAGAATCTCTCAAAGAGAAGATGAAATGGGGCCTCGAGATCTGGAAATGGTGTTTAGTGATGATGGTGATCATCTGCGGTCGCCTCGTCTCCGGTTGGGTCATGGGTGTTCTCGTCTTCGTCATCGAACGAAACTTCATGCTCCGTGAAAAAGTCCTCTACTTTGTGTACGGACTCCGCAAAAGCTTCCAGAATTGTGTCTGGTTAGGTCTGGTTCTAATTTCCTGGACGGTCATGGTCAGCCCAGAAGTCCACAAGCACAACAAATTCCTCCAAAAAGTCTTCAGAGCTCTTATAGCGGTTCTCGTCGGCGCGACGATCTGGCTTCTTAAGATTCTCGCGGTAAAAGTCCTGGCATCGTCGTTCCATGTCGCGACGTTCTTTGATCGGATGAAGGAGAGTGTGTTCCACCACTATATATTAGAAACGTTGTCGGGTCCGCCGCTGGATGAGGAGGAGAGGGAAGTTCCGAAGCACCCGATTCTGAAGCCGTCGAAATCGTTGCCGGCGAGGTTGAGATATGGGAAGAAGAATTCGACGAAGAGGACGGGGTCGCGGAGGATTGATATGGAGAAGCTGAAGAAGCTGAGTATGGAGAGTACGTCGTCTGCTTGGAGTGTTAAGAGGCTGGTGAGCTTCGTGATGTCATCGGGTTTGTCGACGATCTCGAGGACCGTTGATGATTTCGGGAAGGCGGAGTCGGAGATTACGAGCGAGTGGGAGGCTAGAACCTGTGCGCAGAGGATCTTCAAGAATGTCGCAAAGCCAGGCGAGAAGTACATTGAAGAGGAGGATCTATTTAAGTTCTTAAGGAGGGATGAAGTTCATACCATATTTCCTCTCTTTGAAGGTGCTCTTGAGACTGGAAAGATCAGAAAGTCTACTTTTAGGAATTGGGTGGTACAAGCTTACCACGAGCGGAAGGCTCTAGCTCATTCCCTTAATGACACCAAGACAGCAGTGCAGCAGCTTCACAAGATAGCAAGCGCGATTGTGAGCGCGATCATTCTTGTGGTTTTCCTATTGGTGATGGGGCTAGCCACAACCAAGGTCATATTCGTGATCTCATCCCAGCTGCTACTCGTGGGTTTCATGTTCCAGAACACCTGCAAGACCATCTTTGAATCCATCATCTTTGTCTTTGTCATGCACCCTTTCGATGTTGGCGACCGTTGCGTCATCGATGGTGTTCAGATGGTAGTAGACGAGATGAATATTTTGACAACGGTGTTCCTCCGATTCGACATGGAGAAGATCTTCTATCCCAACGCTGTTCTGATCACAAAACCCATCAGCAATTTCTACAGAAGTCCAGACATGGCTGACCTTATCGATTTCTCCATAGACGTTTCCACATCCTTTGACAATGTCAATGCTCTTAAAAAGGAAATACAAGCATACATAGAGAGCAAGCCGAAGTATTGGAGCCCGAAACACTCAGTGATAGTGAAAGAGATTGAGAATGTGAACAAGATGAAAATGTGTCTCTGCGTCTTTCACACTATGAACCATCAGAACTTCGGGGAGAAAAGCATTCGGAAATCGGAGCTTCTCTTGGAGTTGAAGAGGATCTTCGAGAAGCTTGGAATCAAGTACCACCTCCTTCCTCAAGAGGTGCATCTTTCCCAAGTCAACACGGGCAATGGAAGCATGCCGATGCAATCGTAA 2118 0.4745 MQNPDKEKPTVDQVVLLMDQQSLKPKQSFQTELINDPVVTGGEKPPNPSRTITFRRTNLPKPKARFVESHYPPPSKSILQSDDLLEPFKSQENNYPSTDEDDDDDFSMDEGEEDAAREIYLKKRRKIRWRSLIEWISFCIIMAIMICSLTVESLKEKMKWGLEIWKWCLVMMVIICGRLVSGWVMGVLVFVIERNFMLREKVLYFVYGLRKSFQNCVWLGLVLISWTVMVSPEVHKHNKFLQKVFRALIAVLVGATIWLLKILAVKVLASSFHVATFFDRMKESVFHHYILETLSGPPLDEEEREVPKHPILKPSKSLPARLRYGKKNSTKRTGSRRIDMEKLKKLSMESTSSAWSVKRLVSFVMSSGLSTISRTVDDFGKAESEITSEWEARTCAQRIFKNVAKPGEKYIEEEDLFKFLRRDEVHTIFPLFEGALETGKIRKSTFRNWVVQAYHERKALAHSLNDTKTAVQQLHKIASAIVSAIILVVFLLVMGLATTKVIFVISSQLLLVGFMFQNTCKTIFESIIFVFVMHPFDVGDRCVIDGVQMVVDEMNILTTVFLRFDMEKIFYPNAVLITKPISNFYRSPDMADLIDFSIDVSTSFDNVNALKKEIQAYIESKPKYWSPKHSVIVKEIENVNKMKMCLCVFHTMNHQNFGEKSIRKSELLLELKRIFEKLGIKYHLLPQEVHLSQVNTGNGSMPMQS* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01269 705 MobiDBLite consensus disorder prediction 35 109 - -
Eupl08g01269 705 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 34 696 IPR016688 -
Eupl08g01269 705 Pfam Mechanosensitive ion channel 476 681 IPR006685 GO:0016020|GO:0055085
Eupl08g01269 705 Gene3D - 535 584 IPR023408 -
Eupl08g01269 705 SUPERFAMILY Sm-like ribonucleoproteins 525 584 IPR010920 -
Eupl08g01269 705 FunFam Predicted mechanosensitive ion channel 535 584 - -
Eupl08g01269 705 PIRSF Memb_At2g17000 18 703 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01269 Eupl-Chr8 33377613 33385520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01269 53 695 Mechanosensitive Ion Channel Family AT5G12080 46.246 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01269 K22048 - nnu:104612886 1006.13