Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01266 ATGGCGGTTAATCTGACTAGCAATGCCATAGCTATGATTTGTAACGGCGAGTTCCAGGGGGATGATGCGAAGCCGGTTGTTCAAGTTGCGGACATTAAGTTATTGAGCGCAGGACAGCAAAACAGCACTGAGCGGTATCGGATGCTACTTTCGGATGGAATGCATCTGCAGCAAGGGATGCTTGCGACACAGATGAACAATTTGGTTCATTCGGGGAAGTTGCAGAAAGGATCAGTCGTTCAGTTGTCCCAGTTTGTCAGTCAAATGATCCAGAATCGCAAGATTATTATCATCATCGATTTGAATGTGATACTGGAAAAGTGTGATCCTATCGGAGAACCAAAGCAATATGTGCAAGGTGGTGGCACTGCCAGTGGTCCTGCTCCACAGGCTAGGCCTTCCATGCTGGGCAGTCTTCCATGGATCAGCCAGGGATGGCAATGGGGAATCCTCAGTCTTATGGTGGTGGTTCAGTTGCCAGTGGTCCTCTCCATGGACAAAATGTAA 507 0.4832 MAVNLTSNAIAMICNGEFQGDDAKPVVQVADIKLLSAGQQNSTERYRMLLSDGMHLQQGMLATQMNNLVHSGKLQKGSVVQLSQFVSQMIQNRKIIIIIDLNVILEKCDPIGEPKQYVQGGGTASGPAPQARPSMLGSLPWISQGWQWGILSLMVVVQLPVVLSMDKM* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01266 168 SUPERFAMILY Nucleic acid-binding proteins 1 112 IPR012340 -
Eupl08g01266 168 Gene3D - 3 118 IPR012340 -
Eupl08g01266 168 Pfam Replication factor-A protein 1, N-terminal domain 5 105 IPR007199 GO:0003677|GO:0005634|GO:0006260
Eupl08g01266 168 CDD RPA1N 9 104 IPR007199 GO:0003677|GO:0005634|GO:0006260
Eupl08g01266 168 PANTHER RPA-RELATED PROTEIN RADX 22 118 IPR040893 GO:0003697
Eupl08g01266 168 FunFam Replication protein A subunit 4 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01266 Eupl-Chr8 33324219 33329445 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01266 1 121 Core DNA Replication Machinery Family AT4G19130 48.361 4.79e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01266 K07466 - ming:122082537 183.341