Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01251 ATGTATGATGAGACTCATTACTTTGATACTCATGATCCTCACCTCATTCCAGGAGGATCAGGAGGCTTACCACCACTCATGAATGGAAGCACAAGCAGCAACAACAGCTTAGAAGAGAATCTTAGGCTCTGTAATTTCTCTCTTGAGGAAGAAGCAGCTGCTGCTGCCTCCACCACTGCAGCTGTTGCTACCATGGAATTCGAGATGGAACAAGAATTCAACAACCCTCATTTGATGCAGGAAGTACTACACGATCCAAACCAAGCACCGTCGTTGGATCAGCAGAATTGGGACGGTGGGGTTCAAGAGATGCAAGATATGAGTTTCCAACAGCAATATCATCACCATCATCACCATGATCAAGAACAGCAAATTGCACTTCAGCAGCAGCAGCATAATCTCCAATGCTTCAATTCAAATCCCTTTGCAAACCCACCAACACCTGACCTTCTCAACCTCCTACACTTCCCAAGATGCTCAGTGTCGTCAATGCTCCCCAATTCATCCATCTCCTTCACTAACCCAAACAAGAAACCAGGGAATTTTCATAGCTCATTAGATATCTTCGGAGAACTCGCGGCCGTCGATAGTGCATCGGCATCGACGGTTTTGTATGACCCATCACTTCATTTGAACCTCCCACCACAGCCTCCTATATTTAGAGAGCTATTTCACTCTTTGCCACACAACTATGGGTTGCCAGGAACAAGGGGTGGTGGTTCATTGTTTGGTGGTATGGATGAGAGGGAGGGAATGGAAGGTGTTTATCAAGATGGAGATGGAAGGCAGTTTGAGAATTCAGTGTTGGAATTCAGGAGGGAGATTAGTAGTGGATTGGGTAGGGGAGCTGAAATGAAGGGGACTCACCATTTTGCTACTGAGAGACAAAGGAGAGAGCAATTGAATGAGAAATATAAGGCATTGAGGCTACTGGTTCCTAACCCTACTAAGTCTGATAGAGCCTCAGTGGTTGGAGATGCAATTGACTACATCAAAGAGCTTCTTAGAACAGTTGATGAGCTAAAAATACTAATAGATAAGAAGAGATGTGGAAGAGAGAGAAGCAAGAAGCTCAAGACCGAGGATGAAACAACAGGAGACATGGAGAGCTCCTCAATGAAGCCTCTCAGTTCCATCACTGACCGAGAGAAGTCCATCAATGGATCATTAAGAAGCTCATGGCTCCAAAGGAAATCCAAAGAGACAGAAGTGGATGTCCGAATCATCGACGACGAGGTCACAATCAAACTCATACAGAGAAAGAAGAAGAATTGCTTATTATTTGTATCGAAGATCCTCGACGAACTCCAGTTGGATCTCCTCCATGTCTCCGGTGGGAACATTGGAGATTATTACAGTTTCTTGTTCAATACCAAGATATATGAAGGTTCTTCTGTGTATGCAAGTGCAATAGCCAAGAAGCTCATTGAAGCTGTGGACAGGCACCATGCAGCTTTTCCACCTGGTAGCTTTTAG 1476 0.4472 MYDETHYFDTHDPHLIPGGSGGLPPLMNGSTSSNNSLEENLRLCNFSLEEEAAAAASTTAAVATMEFEMEQEFNNPHLMQEVLHDPNQAPSLDQQNWDGGVQEMQDMSFQQQYHHHHHHDQEQQIALQQQQHNLQCFNSNPFANPPTPDLLNLLHFPRCSVSSMLPNSSISFTNPNKKPGNFHSSLDIFGELAAVDSASASTVLYDPSLHLNLPPQPPIFRELFHSLPHNYGLPGTRGGGSLFGGMDEREGMEGVYQDGDGRQFENSVLEFRREISSGLGRGAEMKGTHHFATERQRREQLNEKYKALRLLVPNPTKSDRASVVGDAIDYIKELLRTVDELKILIDKKRCGRERSKKLKTEDETTGDMESSSMKPLSSITDREKSINGSLRSSWLQRKSKETEVDVRIIDDEVTIKLIQRKKKNCLLFVSKILDELQLDLLHVSGGNIGDYYSFLFNTKIYEGSSVYASAIAKKLIEAVDRHHAAFPPGSF* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01251 491 MobiDBLite consensus disorder prediction 1 21 - -
Eupl08g01251 491 PANTHER TRANSCRIPTION FACTOR BHLH91 52 488 IPR045895 GO:0006355|GO:0048658
Eupl08g01251 491 SMART finulus 291 340 IPR011598 GO:0046983
Eupl08g01251 491 FunFam Transcription factor bHLH91-like 283 352 - -
Eupl08g01251 491 MobiDBLite consensus disorder prediction 356 378 - -
Eupl08g01251 491 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 285 334 IPR011598 GO:0046983
Eupl08g01251 491 CDD bHLH_AtMYC1_like 290 359 IPR045896 -
Eupl08g01251 491 Coils Coil 291 311 - -
Eupl08g01251 491 Gene3D - 282 349 IPR036638 GO:0046983
Eupl08g01251 491 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 288 350 IPR036638 GO:0046983
Eupl08g01251 491 Pfam Helix-loop-helix DNA-binding domain 288 334 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01251 Eupl-Chr8 33096648 33099313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01251 88 490 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 41.549 2.49e-93 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl08g01251 HLH 8.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01251 - - nnu:104587288 624.394