Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01223 ATGGATGAGAAAGGTGGACTGGGTATTAGGAATTGGCATTTCTCGGAGCAGACAGTTGGTGTAGATGCAGTGCTAAAACCCGTGTCGGGTATCCCGGTTCCCAGTGGTACTAATGAACACCAAACTGCTTTTTTGAAGATGGGCACATTTCCCAATAGAAATTCTATGATTCCTCAAACTGAGGCAGAAGCATCTTCTATGGAGTTCAACAGCCACTATTGGGTTCATCAGAGAAGCTTCCTACCTGCCACAAACAGTCCAAATCCACTGCAAGCTACTCAAATAAACACAGAAACAGGACTCCCCGTTGTTCCCACAAGTATGGGTATGCCAACAGCTGGGCCGGGACAGAATGGTGAGTTCGGGACTAAAACCACAAAGATTAGAAAACAGCAACCTTCTACAAAGAAGTCTAATCGTGTTGCCTCTAAGGCTTTGAGGCCAAAGCAACCCAAAAAGAATCCCACTATCTCTACAAAGAGAAAAGAAAATTCTATGTCCACTGCAAAACGTGAGAAGAAGAATCCAGATATTATTATAGACGGAGCCACATTAGACTTTTCCCAGATACCTTCTCCGGTTTGCTCGTGTACCGGTATCTCTCGGCAGTGCTACAGATGGGGTGCTGGTGGATGGCAATCTTCCTGTTGTACCACGAGCATATCTGAATACCCTCTGCCCATGAGTTCCTCAAGGCCTGGAGCACGCATGGCTGGGAGAAAAATGAGTATCGGAGCATATGGAAAGCTTCTACAGAGATTGGCAGCAGAAGGTCATGACCTCTCTAATGCGGTTGACTTGAAGAACCATTGGGCTAAACACGGTACTAATAAGTTTGTTACAATAAAGTAA 852 0.4531 MDEKGGLGIRNWHFSEQTVGVDAVLKPVSGIPVPSGTNEHQTAFLKMGTFPNRNSMIPQTEAEASSMEFNSHYWVHQRSFLPATNSPNPLQATQINTETGLPVVPTSMGMPTAGPGQNGEFGTKTTKIRKQQPSTKKSNRVASKALRPKQPKKNPTISTKRKENSMSTAKREKKNPDIIIDGATLDFSQIPSPVCSCTGISRQCYRWGAGGWQSSCCTTSISEYPLPMSSSRPGARMAGRKMSIGAYGKLLQRLAAEGHDLSNAVDLKNHWAKHGTNKFVTIK* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01223 283 Pfam GAGA binding protein-like family 1 283 IPR010409 -
Eupl08g01223 283 MobiDBLite consensus disorder prediction 156 174 - -
Eupl08g01223 283 SMART GAGA_bind_2 1 283 IPR010409 -
Eupl08g01223 283 PANTHER - 1 283 IPR010409 -
Eupl08g01223 283 MobiDBLite consensus disorder prediction 113 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01223 Eupl-Chr8 32608943 32611733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01223 47 283 BBR or BPC Transcription factor family AT2G35550 50.628 1.24e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Eupl08g01223 GAGA_bind 4.8e-77 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01223 - - nnu:104600398 458.373