Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g01222 ATGGCAATTTGCACAGTTTACACAACCCAATCTCTCAACTCAACCTGTTCAATCTCCACACCAACAAAAACCCACTTGGGTTTTCACCAAAGACAGGTAGTTTTCTATACCACTAGCAAGAAAGTTAGCAGGAGAGGCAACTCCAATGCTTCTGAGATATCATGCTCAGCTGAGGATGCAAAGACTGTTGTGATTGGGTTGGCAGCAGATTCTGGTTGTGGGAAGAGTACCTTCATGAGGAGGTTGACAAGTGTTTTTGGTGGTGCAGCAGAGCCACCTAAAGGTGGCAATCCAGACTCCAACACCTTGATCAGTGACACAACAACTGTGATTTGCTTGGATGATTATCATTCACTTGACAGGACAGGAAGGAAGGAGAATGGAGTGACTGCACTTGATCCAAGAGCCAACGATTTTGATCTCATGTATGAGCAGGTTAAGGCTCTCAAGGAAGGAATTCCAGTTGAGAAGCCTATATATAACCATGTCACTGGTCTCTTGGATCCTCCTGAGCTTATCAAACCTCCCAAGATCCTAGTCATTGAAGGGTTGCACCCAATGTTCGATCCCCGTGTAAGGGACCTTCTCGACTTCAGCATCTACTTGGACATCAGCAACGAGGTCAAGTTTGCTTGGAAAATTCAGAGGGACATGGCGGAACGTGGGCACAGTCTTGAGAGTATTAAAGCTAGTATCGAAGCTCGAAAGCCAGATTTTGATGCTTTCATTGACCCACAGAAGCAATATGCAGATGCAGTGATCGAAGTCCTGCCCACCCAACTCATTCCAGATGATAATGAGGGGAAGGTTTTGAGGGTAAAATTGGTGATGAAAGAAGGTGTGAAGTACTTCAGCCCAGTTTACCTGTTCGACGAGGGATCCACTATCTCATGGATACCCTGCGGAAGGAAACTGACATGCTCGTATCCTGGCATCAAATTCTCCTACGGTCCAGACACTTACTATGGCCACGAGGTGTCTGTTTTGGAGATGGATGGGCAGTTTGACAGATTAGACGAGCTAATTTATGTCGAGAGCCATCTGAGCAACATCTCTACTAAGTTCTATGGCGAAGTTACGCAGCAAATGTTGAAGCACGCTGACTTCCCCGGCAGTAACAATGGCACAGGTCTCTTCCAAACCATAACTGGGTTGAAGATAAGGGACCTCTACGAGCAGATCGTTGCCAGCAAGGTTGTGGCTCCATTAGAAGCAACCAAAGCCTAA 1227 0.4637 MAICTVYTTQSLNSTCSISTPTKTHLGFHQRQVVFYTTSKKVSRRGNSNASEISCSAEDAKTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKENGVTALDPRANDFDLMYEQVKALKEGIPVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDPRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAFIDPQKQYADAVIEVLPTQLIPDDNEGKVLRVKLVMKEGVKYFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFSYGPDTYYGHEVSVLEMDGQFDRLDELIYVESHLSNISTKFYGEVTQQMLKHADFPGSNNGTGLFQTITGLKIRDLYEQIVASKVVAPLEATKA* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g01222 408 PANTHER URIDINE KINASE 56 304 - -
Eupl08g01222 408 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 333 IPR027417 -
Eupl08g01222 408 CDD PRK 64 353 - -
Eupl08g01222 408 ProSitePatterns Phosphoribulokinase signature. 213 226 IPR006082 GO:0005524|GO:0005975|GO:0008974
Eupl08g01222 408 FunFam Phosphoribulokinase 59 289 - -
Eupl08g01222 408 Pfam Phosphoribulokinase / Uridine kinase family 64 262 IPR006083 GO:0005524|GO:0016301
Eupl08g01222 408 Gene3D - 59 287 IPR027417 -
Eupl08g01222 408 PRINTS Phosphoribulokinase family signature 231 254 IPR006082 GO:0005524|GO:0005975|GO:0008974
Eupl08g01222 408 PRINTS Phosphoribulokinase family signature 178 196 IPR006082 GO:0005524|GO:0005975|GO:0008974
Eupl08g01222 408 PRINTS Phosphoribulokinase family signature 69 86 IPR006082 GO:0005524|GO:0005975|GO:0008974
Eupl08g01222 408 PRINTS Phosphoribulokinase family signature 213 230 IPR006082 GO:0005524|GO:0005975|GO:0008974
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g01222 Eupl-Chr8 32597788 32601344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g01222 116 290 PRT Gene Family AT3G27440 28.889 4.78e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g01222 K00855 - nnu:104611432 765.377